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INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY logo International Journal of Systematic and Evolutionary Microbiology

Volume 70, Issue 3

Ornithinimicrobium cerasi sp. nov., isolated from the fruit of and emended description of the genus Free

Abstract

Strain CPCC 203383, isolated from the surface-sterilized fruit of (Lindl.) G. Don, was taxonomically characterized based on a polyphasic investigation. It had the highest 16S rRNA gene sequence similarities with DSM 21552 (97.2 %) and DSM 17687 (97.2%). Phylogenetic analysis based on 16S rRNA gene sequences showed that the strain formed a distinct phyletic branch within the genus and the whole genome sequence data analyses supported that strain CPCC 203383 was phylogenetically related to the species. The isolate shared a range of phenotypic patterns reported for members of the genus , but also had a range of cultural, physiological and biochemical characteristics that separated it from related species. The menaquinone was MK-8(H). The polar lipid profile consisted of diphosphatidylglycerol (DPG), phosphatidylglycerol (PG), phosphatidylinositol (PI) and unidentified lipids (ULs). The major fatty acids (>5 %) were -C, -C, -C 9- C, -C and -C. The cell wall peptidoglycan contains -ornithine as diagnostic diamino acid and an interpeptide bridge consisting of -Orn←-Ala←Gly←-Asp. The combined genotypic and phenotypic data indicated that the isolate represents a novel species of the genus for which the name sp. nov. is proposed, with CPCC 203383(=NBRC 113522=KCTC 49200) as the type strain. The DNA G+C composition is 72.3 mol%. The availability of new data allows for an emended description of the genus .

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  • Accepted:
  • Revised:
  • Published Online:
Keyword(s): CPCC 203383 , emended description , Ornithinimicrobium and polyphasic taxonomy
Funding
This study was supported by the:
  • National Natural Science Foundation of China (Award 81373452 and 81621064)
    • Principle Award Recipient: Li-yan Yu
  • National Natural Science Foundation of China (Award 31400045)
    • Principle Award Recipient: Xiao-Mei Fang
  • National Infrastructure of Microbial Resources (Award NIMR-2019-3)
    • Principle Award Recipient: Li-yan Yu
  • CAMS Initiative for Innovative Medicine (Award 2016-I2M-3-014 and 2016-I2M-2-003)
  • Key Technologies Research and Development Program (Award 2017YFD0201401)
    • Principle Award Recipient: Li-yan Yu
  • National Major Science and Technology Projects of China (CN) (Award 2018ZX09711001-007-001)
    • Principle Award Recipient: Li-yan Yu
© 2020 The Authors
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2020-01-14
2025-01-26
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Ornithinimicrobium cerasi sp. nov., isolated from the fruit of Cerasus pseudocerasus and emended description of the genus Ornithinimicrobium
Int J Syst Evol Microbiol 70, 1691 (2020); https://doi.org/10.1099/ijsem.0.003957
/content/journal/ijsem/10.1099/ijsem.0.003957
/content/journal/ijsem/10.1099/ijsem.0.003957
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