Rhodobacter sediminicola sp. nov., isolated from a fresh water pond

References

1. Imhoff JF. Genus Rhodobacter . In Brenner DJ, Krieg NR, Staley JT, Garrity GM. (editors) Bergey’s Manual of Systematic Bacteriology 2, part C, 2nd ed. New York: Springer; 2005 pp 161–167
   [Google Scholar]
2. Girija KR, Sasikala C, Ramana CV, Sproer C, Takaichi S et al. Rhodobacter johrii sp. nov., an endospore-producing cryptic species isolated from semi-arid tropical soils. Int J Syst Evol Microbiol 2010; 60:2099–2107 [View Article]
   [Google Scholar]
3. Suresh G, Sailaja B, Ashif A, Dave BP, Sasikala C et al. Description of Rhodobacter azollae sp. nov. and Rhodobacter lacus sp. nov. Int J Syst Evol Microbiol 2017; 67:3289–3295 [View Article]
   [Google Scholar]
4. Gandham S, Lodha T, Chintalapati S, Chintalapati VR. Rhodobacter alkalitolerans sp. nov., isolated from an alkaline brown pond. Arch Microbiol 2018; 200:1487–1492 [View Article]
   [Google Scholar]
5. Raj PS, Ramaprasad EVV, Vaseef S, Sasikala C, Ramana CV. Rhodobacter viridis sp. nov., a phototrophic bacterium isolated from mud of a stream. Int J Syst Evol Microbiol 2013; 63:181–186 [View Article]
   [Google Scholar]
6. Hanada S, Matsuura K, Nakamura K, Takaichi S. Roseiflexus castenholzii gen. nov., sp. nov., a thermophilic, filamentous, photosynthetic bacterium that lacks chlorosomes. Int J Syst Evol Microbiol 2002; 52:187–193 [View Article]
   [Google Scholar]
7. Trüper HG, Pfennig N. Characterization and Identification of the Anoxygenic Phototrophic Bacteria. In Starr MP, Stolp H, Trüper HG. (editors) The Prokaryotes: a Handbook on Habitats, Isolation, and Identification of Bacteria 1 Springer: New York; 1981 pp 298–312
   [Google Scholar]
8. Oren A. Characterization of pigments of prokaryotes and their use in taxonomy and classification. Method Microbiol 2011; 36:261–282
   [Google Scholar]
9. Nobel PS. Photochemistry of photosynthesis. Physicochemical and Environmental Plant Physiology 4 2009 pp 228–275
   [Google Scholar]
10. Ramaprasad EVV, Sasikala Ch, Ramana ChV. Neurosporene is the major carotenoid accumulated by Rhodobacter viridis JA737. Biotechnol Lett 2013; 35:1093–1097 [View Article]
    [Google Scholar]
11. Imhoff JF. Quinones of phototrophic purple bacteria. FEMS Microbiol Lett 1984; 25:85–89 [View Article]
    [Google Scholar]
12. Hiraishi A, Hoshino Y. Distribution of rhodoquinone in Rhodospirillaceae and its taxonomic implications. J Gen Appl Microbiol 1984; 30:435–448 [View Article]
    [Google Scholar]
13. Hiraishi A, Hoshino Y, Kitamura H. Isoprenoid quinone composition in the classification of Rhodospirillaceae . J Gen Appl Microbiol 1984; 30:197–210 [View Article]
    [Google Scholar]
14. Sasser M. Identification of Bacteria by Gas Chromatography of Cellular Fatty Acids, MIDI Technical note 101. Newark, DE: MIDI Inc; 1990
    [Google Scholar]
15. Kates M. Techniques of Lipidology. Isolation, analysis and identification of lipids. In Burdon RH, van Knippenberg PH. (editors) Laboratory Techniques in Biochemistry and Molecular Biology 3, part 2 Elsevier: Amsterdam; 1986 pp 100–112
    [Google Scholar]
16. Tindall BJ. Lipid composition of Halobacterium lacusprofundi . FEMS Microbiol Lett 1990; 66:199–202 [View Article]
    [Google Scholar]
17. Tindall BJ. A comparative study of the lipid composition of Halobacterium saccharovorum from various sources. Syst Appl Microbiol 1990; 13:128–130 [View Article]
    [Google Scholar]
18. Oren A, Duker S, Ritter S. The polar lipid composition of Walsby's square bacterium. FEMS Microbiol Lett 1996; 138:135–140 [View Article]
    [Google Scholar]
19. Kates M. Techniques in lipidology. Laboratory Techniques in Biochemistry and Molecular Biology part 2 American Elsevier Publishing Company 3; 1972 pp 355–356
    [Google Scholar]
20. Divyasree B, Suresh G, Sasikala C, Ramana CV. Chryseobacterium salipaludis sp. nov., isolated at a wild ass sanctuary. Int J Syst Evol Microbiol 2018; 68:542–546 [View Article]
    [Google Scholar]
21. Yoon SH, SM H, Kwon S, Lim J, Kim Y et al. Introducing EzBioCloud: a taxonomically united database of 16S rRNA and whole genome assemblies. Int J Syst Evol Microbiol 2017; 67:1613–1617
    [Google Scholar]
22. Chun J, Oren A, Ventosa A, Christensen H, Arahal DR et al. Proposed minimal standards for the use of genome data for the taxonomy of prokaryotes. Int J Syst Evol Microbiol 2018; 68:461–466 [View Article]
    [Google Scholar]
23. Tamura K, Stecher G, Peterson D, Filipski A, Kumar S. MEGA6: molecular evolutionary genetics analysis version 6.0. Mol Biol Evol 2013; 30:2725–2729 [View Article]
    [Google Scholar]
24. Kimura M. A simple method for estimating evolutionary rates of base substitutions through comparative studies of nucleotide sequences. J Mol Evol 1980; 16:111–120 [View Article]
    [Google Scholar]
25. Auch AF, Klenk H-P, Göker M. Standard operating procedure for calculating genome-to-genome distances based on high-scoring segment pairs. Stand Genomic Sci 2010; 2:142–148 [View Article]
    [Google Scholar]
26. Rosselló-Móra R, Amann R. Past and future species definitions for bacteria and Archaea . Syst Appl Microbiol 2015; 38:209–216 [View Article]
    [Google Scholar]
27. Lee I, Ouk Kim Y, Park S-C, Chun J. OrthoANI: an improved algorithm and software for calculating average nucleotide identity. Int J Syst Evol Microbiol 2016; 66:1100–1103 [View Article]
    [Google Scholar]
28. Richter M, Rosselló-Móra R. Shifting the genomic gold standard for the prokaryotic species definition. Proc Natl Acad Sci USA 2009; 106:19126–19131 [View Article]
    [Google Scholar]
29. Suresh G, Lodha TD, Indu B, Sasikala C, Ramana CV. Taxogenomics resolves conflict in the genus Rhodobacter: a two and half decades pending thought to reclassify the genus Rhodobacter . Front Microbiol 2019; 10:2480 [View Article]
    [Google Scholar]