sp. nov., a novel endophytic actinobacterium isolated from Briq. Free

Abstract

A Gram-stain-positive, aerobic, coccus-shaped, non-spore-forming actinobacterium, designated strain N5BH11, was isolated from a surface-sterilized sample of Briq. collected from Guizhou, PR China and tested by a polyphasic approach to determine its taxonomic position. Strain N5BH11 grew optimally at 30 °C, pH 6.0–7.0. Substrate mycelia and aerial mycelia were not formed, and no diffusible pigments were observed on the media tested. Phylogenetic analysis based on 16S rRNA gene sequence suggested that strain N5BH11 belonged to the genus and had the highest 16S rRNA gene sequence similarity to DS-52 (98.1 %). The DNA GC content of strain N5BH11 was 71.6 mol%. The average nucleotide identity values between strain N5BH11 and the type strains of , and were 74.0, 76.5 and 73.6 %, respectively. The estimated DDH values between strain N5BH11 and the type strains of , and were 20.3%, 21.4 and 20.2 %, respectively. The cell-wall peptidoglycan contained -diaminopimelic acid, and MK-8(H) was the predominant menaquinone. The predominant polar lipids were diphosphatidylglycerol, phosphatidylethanolamine, phosphatidylmonomethylethanolamine and unidentified phospholipids. The major fatty acids were iso-C, anteiso-C, C and Cω7. On the basis of the results of phylogenetic analysis and phenotypic and chemotaxonomic characteristics, strain N5BH11 represents a novel species of the genus , for which the name sp. nov. is proposed. The type strain is N5BH11 (=KCTC 49196=CGMCC 4.7524).

Funding
This study was supported by the:
  • Youth Science and technology personnal growth project of Guizhou Provincial Education Department (Award Qian Jiao He KY Zi[2016]200)
    • Principle Award Recipient: Li Tuo
  • Science and Technology Foundation of Guizhou Province (Award Qian Ke He Jichu[2019]1347)
    • Principle Award Recipient: Li Tuo
  • National Natural Science Foundation of China, http://dx.doi.org/10.13039/501100001809 (Award 81960642)
  • National Natural Science Foundation of China (Award 81603079)
    • Principle Award Recipient: Li Tuo
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2019-11-11
2024-03-29
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