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Volume 70, Issue 1

sp. nov., isolated from the Karakum Desert Free

Abstract

An isolate, 13K206, with typical morphological characteristics of the genus was obtained during a study searching for novel actinobacteria with biosynthetic potential from the Karakum Desert. A polyphasic approach was adopted to determine taxonomic affiliation of the strain. The strain showed chemotaxonomical properties consistent with its classification in the genus such as - and 3-OH-Apm in the cell-wall peptidoglycan, xylose in whole-cell hydrolysate and diphosphatidylglycerol, phosphatidylethanolamine and phosphatidylinositol as major polar lipids. The results of phylogenetic analysis based on 16S rRNA gene sequences revealed that the strain was closely related to ‘’ S3-1, DSM 43818 and DS3186 with sequence similarities of 98.6, 98.5 and 98.4 %, respectively. Digital DNA–DNA hybridization and average nucleotide identity analyses in addition to gene analysis confirmed the assignment of the strain to a novel species within the genus for which the name sp. nov. is proposed. The type strain is 13K206 (=JCM 32583=DSM 107532). The DNA G+C content of the type strain is 72.4 mol%.

  • Received:
  • Accepted:
  • Published Online:
Keyword(s): Karakum Desert , Micromonospora , phylogenomics and polyphasic taxonomy
Funding
This study was supported by the:
  • Ondokuz Mayis Üniversitesi, http://dx.doi.org/10.13039/501100004202 (Award PYO.FEN.1901.16.001)
© 2020 The Authors
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Micromonospora deserti sp. nov., isolated from the Karakum Desert
Int J Syst Evol Microbiol 70, 282 (2020); https://doi.org/10.1099/ijsem.0.003752
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