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INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY logo International Journal of Systematic and Evolutionary Microbiology

Volume 69, Issue 9

sp. nov., isolated from abandoned arsenic-contaminated farmland soil Free

Abstract

A Gram-stain-negative, aerobic, rod-shaped, non-motile, pink-pigmented bacterium, designated NL, was isolated from arsenic-contaminated farmland soil. Strain NL showed the highest 16S rRNA gene sequence similarities with those of 1-3-3-8 (98.9 %), ANT-18 (97.5 %), KBP-30 (97.4 %), Myx2105 (97.1 %) and WW84 (96.4 %). The values of genomic orthoANI and dDDH between strain NL and KCTC 52741 was 90.5 and 41.2 %, respectively, and those between strain NL and KCTC 52166 was 84.4 and 28.4 %, respectively. Strain NL exhibited DNA–DNA hybridisation values of 41.3 and 44.1 % with KCTC 32237 and DSM 11117, respectively. Strain NL had major fatty acids (>10 %) of summed feature 4 (iso-C I and/or anteiso-C B), iso-C and anteiso-C and the predominant polyamine of homospermidine. The only respiratory quinone was menaquinone-7. The polar lipids were phosphatidylethanolamine, phospholipid, three unidentified lipids and two amino lipids. Strain NL had a genome size of 6.04 Mb and the average G+C content of 65.6 %. Compared to the other spp., strain NL is different in polar lipid profile (without aminophospholipid) and leucine arylamidase activity. Based on the data of the polyphasic analysis, it is considered that strain NL represented a novel species of genus , for which the name sp. nov. is proposed. The type strain is NL (=KCTC 62521=CCTCC AB 2018028).

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  • Accepted:
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Keyword(s): Cytophagaceae and Hymenobacter edaphi
© 2019 IUMS
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2019-09-01
2025-04-30
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Hymenobacter edaphi sp. nov., isolated from abandoned arsenic-contaminated farmland soil
Int J Syst Evol Microbiol 69, 2921 (2019); https://doi.org/10.1099/ijsem.0.003578
/content/journal/ijsem/10.1099/ijsem.0.003578
/content/journal/ijsem/10.1099/ijsem.0.003578
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