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Volume 69, Issue 11

gen. nov., sp. nov., isolated from a deep-sea hydrothermal sediment in the West Pacific Ocean Free

Abstract

A novel Gram-stain-negative bacterium, designated as SCSIO 06110, was isolated from a deep-sea sediment of the West Pacific Ocean. Cells were 0.5–0.8 µm in width and 3.0–4.0 µm in length, spore-forming, rod-shaped with peritrichous flagella. Positive for catalase and urease, negative for oxidase and nitrate reduction. Growth occurred at 15–37 °C, pH 6–9 and 1–5 % (w/v) NaCl, with optimum growth at 28 °C, pH 7 and 3 % (w/v) NaCl. MK-7 was the only menaquinone. The strain possessed diphosphatidylglycerol, phosphatidylethanolamine, phosphatidylglycerol and two unidentified phospholipids. Iso-C, iso-C and iso-C were the major fatty acids. The novel isolate clustered with genera in the family , but formed a separated branch with the closest relative J15A17 (91.1 % sequence similarity) when compared in a phylogenetic analysis of 16S rRNA gene sequences. The DNA G+C content of strain SCSIO 06110 was 38.5 mol%. Based on the polyphasic data presented, a new genus, gen. nov., is proposed in the family with the type species sp. nov. and the type strain SCSIO 06110 (=DSM 105158=CGMCC 1.16550).

  • Received:
  • Accepted:
  • Published Online:
Keyword(s): hydrothermal vent , Longirhabdus pacifica gen. nov., sp. nov. , Paenibacillaceae , polyphasic taxonomy and West Pacific Ocean
© 2019 The Authors
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2019-11-01
2024-04-19
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Longirhabdus pacifica gen. nov., sp. nov., isolated from a deep-sea hydrothermal sediment in the West Pacific Ocean
Int J Syst Evol Microbiol 69, 3362 (2019); https://doi.org/10.1099/ijsem.0.003526
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