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INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY logo

Volume 69, Issue 8

sp. nov., a novel species for pectinolytic isolates from surface waters in Europe and Asia Free

Abstract

Strains 2B12, FVG1-MFV-O17 and FVG10-MFV-A16 were isolated from fresh water samples collected in Asia and Europe. The nucleotide sequences of the barcodes revealed that all three strains belonged to the same cluster within the genus . Using 13 housekeeping genes (, , , , , , , , , , , and ), multilocus sequence analysis confirmed the existence of a new clade. When the genome sequences of these three isolates and other species were compared, the DNA–DNA hybridization and average nucleotide identity values were found to be no more than 45.50 and 91.22 %, respectively. The closest relative species was . Genome comparisons also highlighted genetic traits differentiating the new strains from strains DSM 101947 (=CFBP 8607) and B16. Phenotypical tests were performed to distinguish the three strains from and other species. The name sp. nov. is proposed with strain 2B12 (=CFBP 8650=LMG 30903) as the type strain.

  • Received:
  • Accepted:
  • Published Online:
Keyword(s): Dickeya , enterobacteria , fresh water and pectinolytic
© 2019 IUMS
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2019-08-01
2024-04-19
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Dickeya undicola sp. nov., a novel species for pectinolytic isolates from surface waters in Europe and Asia
Int J Syst Evol Microbiol 69, 2440 (2019); https://doi.org/10.1099/ijsem.0.003497
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