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Volume 69, Issue 4

Description of sp. nov., isolated from Blume Free

Abstract

A Gram-staining-negative, strictly aerobic, non-motile strain, SYSUP0001, was isolated from tubers of Blume. The 16S rRNA gene sequence result indicated that SYSUP0001 represents a member of the genus , with the highest sequence similarity (97.7 %) to the type strain of . SYSUP0001 grew at 14–37 °C and pH 6–8, with optimum growth at 28 °C and pH 7. Tolerance to NaCl was up to 3 % (w/v) with optimum growth in the absence of NaCl. The respiratory quinone was Q-10. The major fatty acids were Cω7, Summed feature 3 (Cω7/Cω6), and C. The polar lipids were diphosphatidylglycerol (DPG), phosphatidylethanolamine (PE), phosphatidylglycerol (PG), sphingoglycolipid (SGL), phosphatidylcholine (PC) and four unidentified polar lipids (L). The DNA G+C content was 67.5 %. The average nucleotide identity (ANI) values between SYSUP0001 and closely related members of the genus were below the cut-off level (95–96 %) for species delineation. On the basis of the phenotypic, phylogenetic and chemotaxonomic characterizations, SYSUP0001 represents a novel species of the genus , for which the name sp. nov. is proposed. The type strain is SYSUP0001 (=KCTC 62179 =CGMCC 1.16462).

  • Received:
  • Accepted:
  • Published Online:
Keyword(s): endophyte , Gastrodia elataBlume , genome analysis and Sphingomonas mesophila
Funding
This study was supported by the:
  • Natural Science Foundation of Guangdong Province (Award 2016A030312003)
  • Princess Nourah Bint Abdulrahman University (Award RGP-1438-0004)
© 2019 IUMS
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2019-02-08
2024-04-19
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Description of Sphingomonas mesophila sp. nov., isolated from Gastrodia elata Blume
Int J Syst Evol Microbiol 69, 1030 (2019); https://doi.org/10.1099/ijsem.0.003263
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