1887

Abstract

A strain (SYPF 7183) was isolated from rhizosphere soil of Panax notoginseng in southwest China. Phylogenetic analyses indicated that strain SYPF 7183 was distinct from the other Absidia species with well-supported values. Strain SYPF 7183 produced spherical or subpyriform sporangia and short cylindrical sporangiospores. The azygospores were globose to oval. Based on morphological and phylogenetic evidence, the novel strain Absidia panacisoli sp. nov. is proposed.

Loading

Article metrics loading...

/content/journal/ijsem/10.1099/ijsem.0.002857
2018-06-21
2019-10-17
Loading full text...

Full text loading...

/deliver/fulltext/ijsem/68/8/2468.html?itemId=/content/journal/ijsem/10.1099/ijsem.0.002857&mimeType=html&fmt=ahah

References

  1. van Tieghem P. Troisième mémoire sur les Mucorinées. Annales des Siences Naturelles, Botanique, sér VI 1876;4:312–398
    [Google Scholar]
  2. Walther G, Pawłowska J, Alastruey-Izquierdo A, Wrzosek M, Rodriguez-Tudela JL et al. DNA barcoding in Mucorales: an inventory of biodiversity. Persoonia 2013;30:11–47 [CrossRef][PubMed]
    [Google Scholar]
  3. Hesseltine CW, Ellis JJ. The genus Absidia: Gongronella and cylindrical-spored species of Absidia. Mycologia 1964;56:568–601 [CrossRef]
    [Google Scholar]
  4. Schipper M. Notes on Mucorales—I. Observations on Absidia. Persoonia 1990;14:133–149
    [Google Scholar]
  5. Kirk PM, Cannon PF, Minter DW, Stalpers JA. Ainsworth & Bisby’s Dictionary of the Fungi, 10th ed. Wallingford: CAB International; 2008
    [Google Scholar]
  6. Hesseltine CW, Ellis JJ. Notes on Mucorales, especially Absidia. Mycologia 1961;53:406–426 [CrossRef]
    [Google Scholar]
  7. Ling-Young M. Étude biologique des phénomènes de la sexualité chez les Mucorinées. Appendice Revue Génerale de Botanique 1930;42:730–752
    [Google Scholar]
  8. Hoffmann K, Discher S, Voigt K. Revision of the genus Absidia (Mucorales, Zygomycetes) based on physiological, phylogenetic, and morphological characters; thermotolerant Absidia spp. form a coherent group, Mycocladiaceae fam. nov. Mycol Res 2007;111:1169–1183 [CrossRef][PubMed]
    [Google Scholar]
  9. Schoch CL, Seifert KA, Huhndorf S, Robert V, Spouge JL et al. Nuclear ribosomal internal transcribed spacer (ITS) region as a universal DNA barcode marker for Fungi. Proc Natl Acad Sci USA 2012;109:6241–6246 [CrossRef][PubMed]
    [Google Scholar]
  10. Hoffmann K. Identification of the genus Absidia (Mucorales, Zygomycetes): A aomprehensive taxonomic revision. Molecular Identification of Fungi Berlin: Springer; 2010; pp.439–460
    [Google Scholar]
  11. Zhang T, Deng X, Yu Y, Zhang M, Zhang Y. Pseudochaetosphaeronema ginkgonis sp. nov., an endophyte isolated from Ginkgo biloba. Int J Syst Evol Microbiol 2016;66:4377–4381 [CrossRef][PubMed]
    [Google Scholar]
  12. White TJ, Bruns T, Lee S, Taylor J. Amplification and direct sequencing of fungal ribosomal RNA genes for phylogenetics. In PCR Protocols: a Guide to Methods and Applications San Diego, CA: Academic Press; 1990; pp.315–322
    [Google Scholar]
  13. Noda H, Kodama K. Phylogenetic position of yeastlike endosymbionts of anobiid beetles. Appl Environ Microbiol 1996;62:162–167[PubMed]
    [Google Scholar]
  14. Rehner SA, Samuels GJ. Molecular systematics of the Hypocreales: a teleomorph gene phylogeny and the status of their anamorphs. Can J Bot 1995;73:816–823 [CrossRef]
    [Google Scholar]
  15. Vilgalys R, Hester M. Rapid genetic identification and mapping of enzymatically amplified ribosomal DNA from several Cryptococcus species. J Bacteriol 1990;172:4238–4246 [CrossRef][PubMed]
    [Google Scholar]
  16. Rehner SA, Buckley E. A Beauveria phylogeny inferred from nuclear ITS and EF1-alpha sequences: evidence for cryptic diversification and links to Cordyceps teleomorphs. Mycologia 2005;97:84–98[PubMed]
    [Google Scholar]
  17. Jaklitsch WM, Komon M, Kubicek CP, Druzhinina IS. Hypocrea voglmayrii sp. nov. from the Austrian Alps represents a new phylogenetic clade in Hypocrea/Trichoderma. Mycologia 2005;97:1365–1378 [CrossRef][PubMed]
    [Google Scholar]
  18. Huang J, Zhang H-S. Development of nucleotide sequence analysis software based on windows. China J Bioinformatics 2004;2:13–17
    [Google Scholar]
  19. Larkin MA, Blackshields G, Brown NP, Chenna R, McGettigan PA et al. Clustal W and Clustal X version 2.0. Bioinformatics 2007;23:2947–2948 [CrossRef][PubMed]
    [Google Scholar]
  20. Kumar S, Stecher G, Tamura K. MEGA7: molecular evolutionary genetics analysis version 7.0 for bigger datasets. Mol Biol Evol 2016;33:1870–1874 [CrossRef][PubMed]
    [Google Scholar]
  21. Ronquist F, Teslenko M, van der Mark P, Ayres DL, Darling A et al. MrBayes 3.2: efficient Bayesian phylogenetic inference and model choice across a large model space. Syst Biol 2012;61:539–542 [CrossRef][PubMed]
    [Google Scholar]
  22. Swofford D. PAUP* 4.0b10: Phylogenetic Analysis Using Parsimony (*And Other Methods) Sunderland, MA: Sinauer Associates; 2002
    [Google Scholar]
  23. Hoffmann K, Pawłowska J, Walther G, Wrzosek M, de Hoog GS et al. The family structure of the Mucorales: a synoptic revision based on comprehensive multigene-genealogies. Persoonia 2013;30:57–76 [CrossRef][PubMed]
    [Google Scholar]
  24. Ariyawansa HA, Hyde KD, Jayasiri SC, Buyck B, Chethana KWT et al. Fungal diversity notes 111–252—taxonomic and phylogenetic contributions to fungal taxa. Fungal Divers 2015;75:27–274 [CrossRef]
    [Google Scholar]
  25. Boedijn KB. Notes on the Mucorales of Indonesia. Sydawia 1958;12:321–362
    [Google Scholar]
http://instance.metastore.ingenta.com/content/journal/ijsem/10.1099/ijsem.0.002857
Loading
/content/journal/ijsem/10.1099/ijsem.0.002857
Loading

Data & Media loading...

Supplements

Supplementary File 1

PDF

Most Cited This Month

This is a required field
Please enter a valid email address
Approval was a Success
Invalid data
An Error Occurred
Approval was partially successful, following selected items could not be processed due to error