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Volume 68, Issue 7

sp. nov., a novel bacterium isolated from soil Free

Abstract

Strain S12-2-1 was isolated from a soil sample collected in the Gyeongsangnam-do province of the Republic of Korea. The isolate is a Gram-stain-negative, aerobic, short, rod-shaped bacterium, and its colonies are red to pink in colour. Analysis of the 16S rRNA gene identified strain S12-2-1 as a member of the genus in the family , with high levels of 16S rRNA gene sequence similarity to OR362-8 (97.7 %), DG5B (97.4 %) and DG31A (97.2 %). The isolate was positive for catalase and oxidase, but negative for acid production from glucose. The growth of strain S12-2-1 was supported at 4–30 °C, pH 7–10 and in the presence of 0–0.5 % NaCl. Strain S12-2-1 contained menaquinone-7 as the predominant respiratory quinone, -homospermidine as the major polyamine and iso-C, anteiso-C and summed feature 3 (Cω7/Cω6) as the major fatty acids. Phosphatidylethanolamine was the major polar lipid. The genomic DNA G+C content was 58.7 mol%. Phenotypic and chemotaxonomic data supported the assignment of the isolate to the genus However, strain S12-2-1 exhibited a relatively low level of DNA–DNA relatedness with (31.7 %), (24.4 %) and (21.3 %). Based on its phenotypic and genotypic properties, along with its phylogenetic distinctiveness, strain S12-2-1 should be considered a novel species in the genus , for which the name sp. nov. is proposed. The type strain is S12-2-1 (=KCTC 52730=JCM 32198).

  • Received:
  • Accepted:
  • Published Online:
Keyword(s): Bacteroidetes , Hymenobacter and soil bacteria
© 2018 IUMS
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2018-07-01
2024-04-19
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Hymenobacter pedocola sp. nov., a novel bacterium isolated from soil
Int J Syst Evol Microbiol 68, 2242 (2018); https://doi.org/10.1099/ijsem.0.002818
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