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INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY logo

Volume 68, Issue 4

Whole-genome sequencing reveals that Kim 2007 can be considered a later heterotypic synonym of Simidu 1990 Free

Abstract

Previously, experimental DNA–DNA hybridization (DDH) between JCM 14758 and JCM 21037 had suggested that the two strains could be considered different species, despite minimal phenotypic differences. The recent isolation of sp. MN-01, with 99 % 16S rRNA gene identity to and , revealed a potential taxonomic problem between these two species. In this study, we reassessed the nomenclature of and using available whole-genome sequences. The whole-genome sequence of JCM 14758 and ten strains showed ≥97.7 % average nucleotide identity and >78.9 % digital DDH, clearly above the recommended species thresholds. According to the rules of priority and in view of the results obtained, is to be considered a later heterotypic synonym of . Because the whole-genome sequence of sp. strain MN-01 shares >99 % ANI with JCM 14758, it can be confidently identified as .

  • Received:
  • Accepted:
  • Published Online:
Keyword(s): heterotypic synonym , Shewanella algae and Shewanella haliotis
© 2018 IUMS
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2018-04-01
2023-12-05
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Whole-genome sequencing reveals that Shewanella haliotis Kim et al. 2007 can be considered a later heterotypic synonym of Shewanella algae Simidu et al. 1990
Int J Syst Evol Microbiol 68, 1356 (2018); https://doi.org/10.1099/ijsem.0.002678
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