1887

Abstract

A novel bacterium, strain Ru1, was encountered during a survey of spirochaetes living in the gastrointestinal tract of ruminants. Comparative analysis of 16S rRNA gene sequence data indicated that strain Ru1 clustered within the genus but shared at most 86.1 % sequence similarity with other recognised species of the genus . Further phylogenetic analysis based on partial recombinase A () gene sequence comparisons, together with phenotypic characterization, also demonstrated the divergence of strain Ru1 from other recognised species of the genus . Microscopically, strain Ru1 appeared as a very small, highly motile, helical spirochaete with eight periplasmic flagella in a 4 : 8 : 4 arrangement. It exhibited C8 esterase lipase, leucine arylamidase, β-galactosidase and β-glucosidase activity. A distinctive, serum-independent growth pattern was also observed, characterized by colonies with an absence of the local haemolysis that is typical of many pathogenic treponemes. On the basis of these data, strain Ru1 is considered to represent a novel species of the genus , for which the name sp. nov. is proposed. The type strain is Ru1 (=DSM 103462=NCTC 13847).

Keyword(s): Bovine , Rumen , Spirochaete and Treponema
Loading

Article metrics loading...

/content/journal/ijsem/10.1099/ijsem.0.001812
2017-05-01
2024-04-24
Loading full text...

Full text loading...

/deliver/fulltext/ijsem/67/5/1349.html?itemId=/content/journal/ijsem/10.1099/ijsem.0.001812&mimeType=html&fmt=ahah

References

  1. Smibert RM. Genus III Treponema. In Krieg NR, Holt JG. (editors) Bergey’s Manual of Systematic Bacteriology vol. 1 Baltimore, MD: Williams and Wilkins; 1984 pp. 49–57
    [Google Scholar]
  2. Choi BK, Nattermann H, Grund S, Haider W, Göbel UB. Spirochetes from digital dermatitis lesions in cattle are closely related to treponemes associated with human periodontitis. Int J Syst Bacteriol 1997; 47:175–181 [View Article][PubMed]
    [Google Scholar]
  3. Dewhirst FE, Tamer MA, Ericson RE, Lau CN, Levanos VA et al. The diversity of periodontal spirochetes by 16S rRNA analysis. Oral Microbiol Immunol 2000; 15:196–202 [View Article][PubMed]
    [Google Scholar]
  4. Engelkens HJ, Niemel PL, van der Sluis JJ, Meheus A, Stolz E. Endemic treponematoses. Part II. Pinta and endemic syphilis. Int J Dermatol 1991; 30:231–238[PubMed] [CrossRef]
    [Google Scholar]
  5. Mitjà O, Asiedu K, Mabey D. Yaws. Lancet 2013; 381:763–773 [View Article][PubMed]
    [Google Scholar]
  6. Radolf JD, Hazlett KRO, Lukehart SA. Pathogenesis of syphilis. In Radolf JD, Lukehart SA. (editors) Pathogenic Treponema: Molecular and Cellular Biology Norfolk: Caister Academic Press; 2006 pp. 197–236
    [Google Scholar]
  7. Cwyk WM, Canale-Parola E. Treponema succinifaciens sp. nov., an anaerobic spirochete from the swine intestine. Arch Microbiol 1979; 122:231–239 [View Article][PubMed]
    [Google Scholar]
  8. Nordhoff M, Taras D, Macha M, Tedin K, Busse HJ et al. Treponema berlinense sp. nov. and Treponema porcinum sp. nov., novel spirochaetes isolated from porcine faeces. Int J Syst Evol Microbiol 2005; 55:1675–1680 [View Article][PubMed]
    [Google Scholar]
  9. Dröge S, Rachel R, Radek R, König H. Treponema isoptericolens sp. nov., a novel spirochaete from the hindgut of the termite Incisitermes tabogae. Int J Syst Evol Microbiol 2008; 58:1079–1083 [View Article][PubMed]
    [Google Scholar]
  10. Graber JR, Leadbetter JR, Breznak JA. Description of Treponema azotonutricium sp. nov. and Treponema primitia sp. nov., the first spirochetes isolated from termite guts. Appl Environ Microbiol 2004; 70:1315–1320 [View Article][PubMed]
    [Google Scholar]
  11. E Edwards J, R Mcewan N, J Travis A, John Wallace R. 16S rDNA library-based analysis of ruminal bacterial diversity. Antonie van Leeuwenhoek 2004; 86:263–281 [View Article][PubMed]
    [Google Scholar]
  12. Paster BJ, Canale-Parola E. Physiological diversity of rumen spirochetes. Appl Environ Microbiol 1982; 43:686–693[PubMed]
    [Google Scholar]
  13. Tajima K, Aminov RI, Nagamine T, Ogata K, Nakamura M et al. Rumen bacterial diversity as determined by sequence analysis of 16S rDNA libraries. FEMS Microbiol Ecol 1999; 29:159–169 [View Article]
    [Google Scholar]
  14. Zinicola M, Lima F, Lima S, Machado V, Gomez M et al. Altered microbiomes in bovine digital dermatitis lesions, and the gut as a pathogen reservoir. PLoS One 2015; 10:e0120504 [View Article][PubMed]
    [Google Scholar]
  15. Evans NJ, Brown JM, Murray RD, Getty B, Birtles RJ et al. Characterization of novel bovine gastrointestinal tract Treponema isolates and comparison with bovine digital dermatitis treponemes. Appl Environ Microbiol 2011; 77:138–147 [View Article][PubMed]
    [Google Scholar]
  16. Ziołecki A. Isolation and characterization of large treponemes from the bovine rumen. Appl Environ Microbiol 1979; 37:131–135[PubMed]
    [Google Scholar]
  17. Ziołecki A, Wojciechowicz M. Small pectinolytic spirochetes from the rumen. Appl Environ Microbiol 1980; 39:919–922[PubMed]
    [Google Scholar]
  18. Paster BJ, Canale-Parola E. Treponema saccharophilum sp. nov., a large pectinolytic spirochete from the bovine rumen. Appl Environ Microbiol 1985; 50:212–219[PubMed]
    [Google Scholar]
  19. Stanton TB, Canale-Parola E. Treponema bryantii sp. nov., a rumen spirochete that interacts with cellulolytic bacteria. Arch Microbiol 1980; 127:145–156 [View Article][PubMed]
    [Google Scholar]
  20. Evans NJ, Brown JM, Demirkan I, Murray RD, Vink WD et al. Three unique groups of spirochetes isolated from digital dermatitis lesions in UK cattle. Vet Microbiol 2008; 130:141–150 [View Article][PubMed]
    [Google Scholar]
  21. Hall T. 2013; BioEdit: Biological sequence alignment editor for Win95/98/NT/2K/XP/7. Carlsbad, CA: Ibis Biosciences; www.mbio.ncsu.edu/bioedit/bioedit.html accessed 08 January 2016
  22. Thompson JD, Higgins DG, Gibson TJ. CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice. Nucleic Acids Res 1994; 22:4673–4680 [View Article][PubMed]
    [Google Scholar]
  23. Stackebrandt E, Goebel BM. Taxonomic note: a place for DNA-DNA reassociation and 16S rRNA sequence analysis in the present species definition in bacteriology. Int J Syst Evol Microbiol 1994; 44:846–849 [View Article]
    [Google Scholar]
  24. Milne I, Lindner D, Bayer M, Husmeier D, Mcguire G et al. TOPALi v2: a rich graphical interface for evolutionary analyses of multiple alignments on HPC clusters and multi-core desktops. Bioinformatics 2009; 25:126–127 [View Article][PubMed]
    [Google Scholar]
  25. Tamura K, Stecher G, Peterson D, Filipski A, Kumar S. MEGA6: molecular evolutionary genetics analysis version 6.0. Mol Biol Evol 2013; 30:2725–2729 [View Article][PubMed]
    [Google Scholar]
  26. Tamura K, Nei M. Estimation of the number of nucleotide substitutions in the control region of mitochondrial DNA in humans and chimpanzees. Mol Biol Evol 1993; 10:512–526[PubMed]
    [Google Scholar]
  27. Evans NJ, Brown JM, Demirkan I, Murray RD, Birtles RJ et al. Treponema pedis sp. nov., a spirochaete isolated from bovine digital dermatitis lesions. Int J Syst Evol Microbiol 2009; 59:987–991 [View Article][PubMed]
    [Google Scholar]
  28. Schrank K, Choi BK, Grund S, Moter A, Heuner K et al. Treponema brennaborense sp. nov., a novel spirochaete isolated from a dairy cow suffering from digital dermatitis. Int J Syst Bacteriol 1999; 49:43–50 [View Article][PubMed]
    [Google Scholar]
  29. Clegg SR, Carter SD, Birtles RJ, Brown JM, Hart CA et al. Multilocus sequence typing of pathogenic treponemes isolated from cloven-hoofed animals and comparison to treponemes isolated from humans. Appl Environ Microbiol 2016; 82:4523–4536 [View Article][PubMed]
    [Google Scholar]
  30. Smibert RM, Johnson JL, Ranney RR. Treponema socranskii sp. nov., Treponema socranskii subsp. socranskii subsp. nov., Treponema socranskii subsp. buccale subsp. nov., and Treponema socranskii subsp. paredis subsp. nov. isolated from the human periodontia. Int J Syst Bacteriol 1984; 34:457–462 [View Article]
    [Google Scholar]
  31. Demirkan I, Williams HF, Dhawi A, Carter SD, Winstanley C et al. Characterization of a spirochaete isolated from a case of bovine digital dermatitis. J Appl Microbiol 2006; 101:948–955 [View Article][PubMed]
    [Google Scholar]
  32. Wyss C, Choi BK, Schüpbach P, Guggenheim B, Göbel UB. Treponema maltophilum sp. nov., a small oral spirochete isolated from human periodontal lesions. Int J Syst Bacteriol 1996; 46:745–752 [View Article][PubMed]
    [Google Scholar]
  33. Wyss C, Choi BK, Schüpbach P, Guggenheim B, Göbel UB. Treponema amylovorum sp. nov., a saccharolytic spirochete of medium size isolated from an advanced human periodontal lesion. Int J Syst Bacteriol 1997; 47:842–845 [View Article][PubMed]
    [Google Scholar]
  34. Wyss C, Moter A, Choi BK, Dewhirst FE, Xue Y et al. Treponema putidum sp. nov., a medium-sized proteolytic spirochaete isolated from lesions of human periodontitis and acute necrotizing ulcerative gingivitis. Int J Syst Evol Microbiol 2004; 54:1117–1122 [View Article][PubMed]
    [Google Scholar]
  35. Wyss C, Dewhirst FE, Gmür R, Thurnheer T, Xue Y et al. Treponema parvum sp. nov., a small, glucoronic or galacturonic acid-dependent oral spirochaete from lesions of human periodontitis and acute necrotizing ulcerative gingivitis. Int J Syst Evol Microbiol 2001; 51:955–962 [View Article][PubMed]
    [Google Scholar]
  36. Wyss C, Choi BK, Schüpbach P, Moter A, Guggenheim B et al. Treponema lecithinolyticum sp. nov., a small saccharolytic spirochaete with phospholipase A and C activities associated with periodontal diseases. Int J Syst Bacteriol 1999; 49:1329–1339 [View Article][PubMed]
    [Google Scholar]
http://instance.metastore.ingenta.com/content/journal/ijsem/10.1099/ijsem.0.001812
Loading
/content/journal/ijsem/10.1099/ijsem.0.001812
Loading

Data & Media loading...

This is a required field
Please enter a valid email address
Approval was a Success
Invalid data
An Error Occurred
Approval was partially successful, following selected items could not be processed due to error