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Volume 66, Issue 11

sp. nov., isolated from soil Free

Abstract

A Gram-stain-negative, non-motile, light-pink-pigmented, aerobic, rod-shaped bacterium, designated V5RD, was isolated from soil of Damxung county in the Qinghai-Tibetan Plateau. Strain V5RD grew luxuriously at 10 °C, at pH 9.0 and in the presence of 1 % NaCl (w/v). Phylogenetic analysis of 16S rRNA gene sequences placed strain V5RD in the genus and found that it was most closely related to DSM 19624 (97.3 %), JCM 16721 (96.84 %), DSM 19486 (96.28 %), JCM 13399 (96.22 %), KCTC 12559 (95.92 %) and DSM 19626 (95.85 %). The G+C content of the genomic DNA of the type strain V5RD was 37.40 mol%. DNA–DNA relatedness for the type strain V5RD with respect to its closest phylogenetic relative, DSM 19624, was 62.5±1.7 %. The polar lipid profile of the strain consisted of phosphatidylethanolamine, one unidentified aminolipid, one unidentified glycolipid and two unidentified polar lipids. Menaquinone MK-7 was the predominant respiratory quinone, and summed feature 3 (comprising C 7 and/or C 6), iso-C and iso-C 3-OH were the major fatty acids. With respect to phenotypic characteristics, biochemical properties and phylogenetic inference, strain V5RD represents a novel species of the genus , for which the name sp. nov is proposed. The type strain is V5RD (=CGMCC 1.15644=DSM 103236).

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Keyword(s): Nobel species , Soil and Tibetan Plateau
© 2016 IUMS
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2016-11-01
2024-04-25
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Pedobacterpsychrotolerans sp. nov., isolated from soil
Int J Syst Evol Microbiol 66, 4560 (2016); https://doi.org/10.1099/ijsem.0.001391
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