1887

Abstract

A Gram-negative, rod-shaped, oxidase-positive, aerobic, non-motile and orange-pigmented bacterial strain, containing flexirubin-type pigments, designated H8, was isolated from raw cow's milk in Israel. 16S rRNA gene sequence analysis indicated that the isolate should be placed in the genus (family , phylum ). The levels of 16S rRNA gene sequence similarity between strain H8 and the type strains of described species were 97.5 % or lower. Strain H8 grew at 5–37 °C and with 0–3.0 % NaCl. The dominant cellular fatty acids were iso-15 : 0, iso-17 : 0 3-OH, iso-17 : 19 and summed feature 3 (comprising iso-15 : 0 2-OH and/or 16 : 17). On the basis of phenotypic properties and phylogenetic distinctiveness, the milk isolate H8 is classified as a member of a novel species in the genus , for which the name sp. nov. (type strain H8 =LMG 24030 =DSM 19055) is proposed.

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2008-11-01
2019-10-19
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References

  1. Behrendt, U., Ulrich, A., Spröer, C. & Schumann, P. ( 2007; ). Chryseobacterium luteum sp. nov., associated with the phyllosphere of grasses. Int J Syst Evol Microbiol 57, 1881–1885.[CrossRef]
    [Google Scholar]
  2. Ben-Ze'ev, I. S., Levy, E., Eilam, T. & Anikster, Y. ( 2005; ). Whole-cell fatty acid profiles – a tool for species and subspecies classification in the Puccinia recondita complex. J Plant Pathol 87, 187–197.
    [Google Scholar]
  3. Bernardet, J.-F., Nakagawa, Y. & Holmes, B. ( 2002; ). Proposed minimal standards for describing new taxa of the family Flavobacteriaceae and emended description of the family. Int J Syst Evol Microbiol 52, 1049–1070.[CrossRef]
    [Google Scholar]
  4. Bernardet, J. F., Vancanneyt, M., Matte-Tailliez, O., Grisez, L., Tailliez, P., Bizet, C., Nowakowski, M., Kerouault, B. & Swings, J. ( 2005; ). Polyphasic study of Chryseobacterium strains isolated from diseased aquatic animals. Syst Appl Microbiol 28, 640–660.[CrossRef]
    [Google Scholar]
  5. Bernardet, J.-F., Hugo, C. & Bruun, B. ( 2006; ). The genera Chryseobacterium and Elizabethkingia. In The Prokaryotes: a Handbook on the Biology of Bacteria, 3rd edn, vol. 7, pp. 638–676. Edited by M. Dworkin, S. Falkow, E. Rosenberg, K. H. Schleifer & E. Stackebrandt. New York: Springer.
  6. de Beer, H., Hugo, C. J., Jooste, P. J., Willems, A., Vancanneyt, M., Coenye, T. & Vandamme, P. A. R. ( 2005; ). Chryseobacterium vrystaatense sp. nov., isolated from raw chicken in a chicken processing plant. Int J Syst Evol Microbiol 55, 2149–2153.[CrossRef]
    [Google Scholar]
  7. de Beer, H., Hugo, C. J., Jooste, P. J., Vancanneyt, M., Coenye, T. & Vandamme, P. ( 2006; ). Chryseobacterium piscium sp. nov., isolated from fish of the South Atlantic Ocean off South Africa. Int J Syst Evol Microbiol 56, 1317–1322.[CrossRef]
    [Google Scholar]
  8. Fautz, E. & Reichenbach, H. ( 1980; ). A simple test for flexirubin-type pigments. FEMS Microbiol Lett 8, 87–91.[CrossRef]
    [Google Scholar]
  9. Felske, A., Rheims, H., Wolterink, A., Stackebrandt, E. & Akkermans, A. D. ( 1997; ). Ribosome analysis reveals prominent activity of an uncultured member of the class Actinobacteria in grassland soils. Microbiology 143, 2983–2989.[CrossRef]
    [Google Scholar]
  10. Gallego, V., Garcia, M. T. & Ventosa, A. ( 2006; ). Chryseobacterium hispanicum sp. nov., isolated from the drinking water distribution system of Sevilla, Spain. Int J Syst Evol Microbiol 56, 1589–1592.[CrossRef]
    [Google Scholar]
  11. González, C. J., Santos, J. A., Garcia-Lopez, M. L. & Otero, A. ( 2000; ). Psychrobacters and related bacteria in freshwater fish. J Food Prot 63, 315–321.
    [Google Scholar]
  12. Hantsis-Zacharov, E. & Halpern, M. ( 2007a; ). Chryseobacterium haifense sp. nov., a psychrotolerant bacterium isolated from raw milk. Int J Syst Evol Microbiol 57, 2344–2348.[CrossRef]
    [Google Scholar]
  13. Hantsis-Zacharov, E. & Halpern, M. ( 2007b; ). Psychrotrophic bacterial communities in raw milk and their proteolytic and lipolytic traits. Appl Environ Microbiol 73, 7162–7168.[CrossRef]
    [Google Scholar]
  14. Hantsis-Zacharov, E., Senderovich, Y. & Halpern, M. ( 2008; ). Chryseobacterium bovis sp. nov., isolated from raw cow's milk. Int J Syst Evol Microbiol 58, 1024–1028.[CrossRef]
    [Google Scholar]
  15. Holmes, B., Owen, R. J., Steigerwalt, A. G. & Brenner, D. J. ( 1984; ). Flavobacterium gleum, a new species found in human clinical specimens. Int J Syst Bacteriol 34, 21–25.[CrossRef]
    [Google Scholar]
  16. Hugo, C. J., Jooste, P. J., Segers, P., Vancanneyt, M. & Kersters, K. ( 1999; ). A polyphasic taxonomic study of Chryseobacterium strains isolated from dairy sources. Syst Appl Microbiol 22, 586–595.[CrossRef]
    [Google Scholar]
  17. Hugo, C. J., Segers, P., Hoste, B., Vancanneyt, M. & Kersters, K. ( 2003; ). Chryseobacterium joostei sp. nov., isolated from the dairy environment. Int J Syst Evol Microbiol 53, 771–777.[CrossRef]
    [Google Scholar]
  18. Kämpfer, P., Dreyer, U., Neef, A., Dott, W. & Busse, H.-J. ( 2003; ). Chryseobacterium defluvii sp. nov., isolated from wastewater. Int J Syst Evol Microbiol 53, 93–97.[CrossRef]
    [Google Scholar]
  19. Kim, K. K., Bae, H.-S., Schumann, P. & Lee, S.-T. ( 2005; ). Chryseobacterium daecheongense sp. nov., isolated from freshwater lake sediment. Int J Syst Evol Microbiol 55, 133–138.[CrossRef]
    [Google Scholar]
  20. Park, M. S., Jung, S. R., Lee, K. H., Lee, M. S., Do, J. O., Kim, S. B. & Bae, K. S. ( 2006; ). Chryseobacterium soldanellicola sp. nov. and Chryseobacterium taeanense sp. nov., isolated from roots of sand-dune plants. Int J Syst Evol Microbiol 56, 433–438.[CrossRef]
    [Google Scholar]
  21. Peterson, W. J., Bell, T. A., Etchells, J. L. & Smart, W. W. G., Jr ( 1954; ). A procedure for demonstrating the presence of carotenoid pigments in yeasts. J Bacteriol 67, 708–713.
    [Google Scholar]
  22. Quan, Z. X., Kim, K. K., Kim, M. K., Jin, L. & Lee, S. T. ( 2007; ). Chryseobacterium caeni sp. nov., isolated from bioreactor sludge. Int J Syst Evol Microbiol 57, 141–145.[CrossRef]
    [Google Scholar]
  23. Shen, F.-T., Kämpfer, P., Young, C.-C., Lai, W.-A. & Arun, A. B. ( 2005; ). Chryseobacterium taichungense sp. nov., isolated from contaminated soil. Int J Syst Evol Microbiol 55, 1301–1304.[CrossRef]
    [Google Scholar]
  24. Shimomura, K., Kaji, S. & Hiraishi, A. ( 2005; ). Chryseobacterium shigense sp. nov., a yellow-pigmented, aerobic bacterium isolated from a lactic acid beverage. Int J Syst Evol Microbiol 55, 1903–1906.[CrossRef]
    [Google Scholar]
  25. Stackebrandt, E. & Ebers, J. ( 2006; ). Taxonomic parameters revisited: tarnished gold standards. Microbiol Today 33, 152–155.
    [Google Scholar]
  26. Stackebrandt, E. & Goebel, B. M. ( 1994; ). Taxonomic note: a place for DNA-DNA reassociation and 16S rRNA sequence analysis in the present species definition in bacteriology. Int J Syst Bacteriol 44, 846–849.[CrossRef]
    [Google Scholar]
  27. Tai, C. J., Kuo, H. P., Lee, F. L., Chen, H. K., Yokota, A. & Lo, C. C. ( 2006; ). Chryseobacterium taiwanense sp. nov., isolated from soil in Taiwan. Int J Syst Evol Microbiol 56, 1771–1776.[CrossRef]
    [Google Scholar]
  28. Tamura, K., Dudley, J., Nei, M. & Kumar, S. ( 2007; ). mega4: molecular evolutionary genetics analysis (mega) software version 4.0. Mol Biol Evol 24, 1596–1599.[CrossRef]
    [Google Scholar]
  29. Vandamme, P., Bernardet, J.-F., Segers, P., Kersters, K. & Holmes, B. ( 1994; ). New perspectives in the classification of the flavobacteria: description of Chryseobacterium gen. nov., Bergeyella gen. nov., and Empedobacter nom. rev. Int J Syst Bacteriol 44, 827–831.[CrossRef]
    [Google Scholar]
  30. Vaneechoutte, M., Kämpfer, P., De Baere, T., Avesani, V., Janssens, M. & Wauters, G. ( 2007; ). Chryseobacterium hominis sp. nov., to accommodate clinical isolates biochemically similar to CDC groups II-h and II-c. Int J Syst Evol Microbiol 57, 2623–2628.[CrossRef]
    [Google Scholar]
  31. Weon, H. Y., Kim, B. Y., Yoo, S. H., Kwon, S. W., Cho, Y. H., Go, S. J. & Stackebrandt, E. ( 2006; ). Chryseobacterium wanjuense sp. nov., isolated from greenhouse soil in Korea. Int J Syst Evol Microbiol 56, 1501–1504.[CrossRef]
    [Google Scholar]
  32. Yabuuchi, E., Kaneko, T., Yano, I., Moss, C. W. & Miyoshi, N. ( 1983; ). Sphingobacterium gen. nov., Sphingobacterium spiritivorum comb. nov., Sphingobacterium multivorum comb. nov., Sphingobacterium mizutae sp. nov., and Flavobacterium indologenes sp. nov.: glucose nonfermenting Gram-negative rods in CDC groups IIK-2 and IIb. Int J Syst Bacteriol 33, 580–598.[CrossRef]
    [Google Scholar]
  33. Yoon, J. H., Kang, S. J. & Oh, T. K. ( 2007; ). Chryseobacterium daeguense sp. nov., isolated from wastewater of a textile dye works. Int J Syst Evol Microbiol 57, 1355–1359.[CrossRef]
    [Google Scholar]
  34. Young, C. C., Kämpfer, P., Shen, F. T., Lai, W. A. & Arun, A. B. ( 2005; ). Chryseobacterium formosense sp. nov., isolated from the rhizosphere of Lactuca sativa L. (garden lettuce). Int J Syst Evol Microbiol 55, 423–426.[CrossRef]
    [Google Scholar]
  35. Zhou, Y., Dong, J., Wang, X., Huang, X., Zhang, K. Y., Zhang, Y. Q., Guo, Y. F., Lai, R. & Li, W. J. ( 2007; ). Chryseobacterium flavum sp. nov., isolated from polluted soil. Int J Syst Evol Microbiol 57, 1765–1769.[CrossRef]
    [Google Scholar]
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