Ogataea ganodermae sp. nov., a methanol-assimilating yeast species isolated from basidiocarps of Ganoderma sp.

References

1. Bai, F.-Y., Liang, H.-Y. & Jia, J.-H.(2000). Taxonomic relationships among the taxa in the Candida guilliermondii complex, as revealed by comparative electrophoretic karyotyping. Int J Syst Evol Microbiol 50, 417–422.[CrossRef] [Google Scholar]
2. Bai, F.-Y., Zhao, J.-H., Takashima, M., Jia, J.-H., Boekhout, T. & Nakase, T.(2002). Reclassification of the Sporobolomyces roseus and the Sporidiobolus pararoseus complexes, with the description of Sporobolomyces phaffii sp. nov. Int J Syst Evol Microbiol 52, 2309–2314.[CrossRef] [Google Scholar]
3. Barnett, J. A., Payne, R. W. & Yarrow, D.(2000).Yeasts: Characteristics and Identification, 3rd edn. Cambridge: Cambridge University Press.
4. Felsenstein, J.(1985). Confidence limits on phylogenies: an approach using the bootstrap. Evolution 39, 783–791.[CrossRef] [Google Scholar]
5. Kimura, M.(1980). A simple method for estimating evolutionary rates of base substitutions through comparative studies of nucleotide sequences. J Mol Evol 16, 111–120.[CrossRef] [Google Scholar]
6. Kurtzman, C. P.(1984). Synonymy of the yeast genera Hansenula and Pichia demonstrated through comparison of deoxyribonucleic acid relatedness. Antonie van Leeuwenhoek 50, 209–217.[CrossRef] [Google Scholar]
7. Kurtzman, C. P.(1998).Pichia E. C. Hansen emend Kurtzman. In The Yeasts, a Taxonomic Study, 4th edn, pp. 273–352. Edited by C. P. Kurtzman & J. W. Fell. Amsterdam: Elsevier.
8. Kurtzman, C. P. & Robnett, C. J.(1998). Identification and phylogeny of ascomycetous yeasts from analysis of nuclear large subunit (26S) ribosomal DNA partial sequences. Antonie van Leeuwenhoek 73, 331–371.[CrossRef] [Google Scholar]
9. Limtong, S., Srisuk, N., Yongmanitchai, W., Yurimoto, H. & Nakase, T.(2008).Ogataea chonburiensis sp. nov. and Ogataea nakhonphanomensis sp. nov., two thermotolerant, methylotrophic yeast species isolated in Thailand and the transfer of Pichia siamensis and Pichia thermomethanolica to the genus Ogataea. Int J Syst Evol Microbiol 58, 302–307.[CrossRef] [Google Scholar]
10. Makimura, K., Murayama, Y. S. & Yamaguchi, H.(1994). Detection of a wide range of medically important fungi by the polymerase chain reaction. J Med Microbiol 40, 358–364.[CrossRef] [Google Scholar]
11. Mikata, K. & Yamada, Y.(1995).Ogataea kodamae, a new combination for a methanol-assimilating yeast species, Pichia kodamae van der Walt et Yarrow. Inst Ferment Osaka Res Commun 17, 99–101. [Google Scholar]
12. Morais, P. B., Teixeira, L. C. R. S., Bowles, J. M., Lachance, M. A. & Rosa, C. A.(2004).Ogataea falcaomoraisii sp. nov., a sporogenous methylotrophic yeast from tree exudates. FEMS Yeast Res 5, 81–85.[CrossRef] [Google Scholar]
13. Péter, G., Tornai-Lehoczki, J., Shin, K.-S. & Dlauchy, D.(2007).Ogataea thermophila sp. nov., the teleomorph of Candida thermophila. FEMS Yeast Res 7, 494–496.[CrossRef] [Google Scholar]
14. Saitou, N. & Nei, M.(1987). The neighbor-joining method: a new method for reconstructing phylogenetic trees. Mol Biol Evol 4, 406–425. [Google Scholar]
15. Suh, S. O., Blackwell, M., Kurtzman, C. P. & Lachance, M. A.(2006). Phylogenetics of Saccharomycetales, the ascomycete yeasts. Mycologia 98, 1006–1017.[CrossRef] [Google Scholar]
16. Thompson, J. D., Gibson, T. J., Plewniak, F., Jeanmougin, F. & Higgins, D. G.(1997). The clustal_x windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools. Nucleic Acids Res 25, 4876–4882.[CrossRef] [Google Scholar]
17. Yamada, Y., Maeda, K. & Mikata, K.(1994). The phylogenetic relationships of the hat-shaped ascospore forming, nitrate-assimilating Pichia species, formerly classified in the genus Hansenula Sydow et Sydow, based on the partial sequences of 18S and 26S ribosomal RNAs (Saccharomycetaceae): the proposal of three new genera, Ogataea, Kuraishia, and Nakazawaea. Biosci Biotechnol Biochem 58, 1245–1257.[CrossRef] [Google Scholar]
18. Yarrow, D.(1998). Methods for the isolation, maintenance and identification of yeasts. In The Yeasts, a Taxonomic Study, 4th edn, pp. 77–100. Edited by C. P. Kurtzman & J. W. Fell. Amsterdam: Elsevier.