Reassessment of the phylogenetic relationships of Thiomonas cuprina

References

1. Altschul S. F., Madden T. L., Schäfer A. A., Zhang J., Zhang Z., Miller W., Lipman D. J. 1997; Gapped blast and psi-blast: a new generation of protein database research programs. Nucleic Acids Res 25:3389–3402 [CrossRef]
   [Google Scholar]
2. Associate Editor, IJSB 1997; Notification that new names and new combinations have appeared in volume 47, no. 2, of the IJSB (p. 919, footnote d). Int J Syst Bacteriol 47:917–919 [CrossRef]
   [Google Scholar]
3. Battaglia-Brunet F., Dictor M.-C., Garrido F., Crouzet C., Morin D., Dekeyser K., Clarens M., Baranger P. 2002; An arsenic(III)-oxidizing bacterial population: selection, characterization, and performance in reactors. J Appl Microbiol 93:656–667 [CrossRef]
   [Google Scholar]
4. Battaglia-Brunet F., Duquesne K. F., Dictor M.-C., Garrido F., Bonnefoy V., Baranger P., Morin D. 2003; Arsenite oxidizing Thiomonas strains isolated from different mining sites. Geophys Res Abstracts 5:11069
   [Google Scholar]
5. Battaglia-Brunet F., Joulian C., Garrido F., Dictor M.-C., Morin D., Coupland K., Johnson D. B., Hallberg K. B., Baranger P. 2006; Oxidation of arsenite by Thiomonas strains and characterization of Thiomonas arsenivorans sp. nov. Antonie van Leeuwenhoek 89:99–108 [CrossRef]
   [Google Scholar]
6. Bruneel O., Personné J.-C., Casiot C., Leblanc M., Elbaz-Poulichet F., Mahler B. J., Le Flèche A., Grimont P. A. D. 2003; Mediation of arsenic oxidation by Thiomonas sp. in acid-mine drainage (Carnoulès, France). J Appl Microbiol 95:492–499 [CrossRef]
   [Google Scholar]
7. Chen X.-G., Geng A.-L., Yan R., Gould W. D., Ng Y.-L., Liang D. T. 2004; Isolation and characterization of sulphur-oxidizing Thiomonas sp. and its potential application in biological deodorization. Lett Appl Microbiol 39:495–503 [CrossRef]
   [Google Scholar]
8. Huber H., Stetter K. O. 1990; Thiobacillus cuprinus sp. nov., a novel facultatively organotrophic metal-mobilizing bacterium. Appl Environ Microbiol 56:315–322
   [Google Scholar]
9. Johnson D. B., Hallberg K. B. 2005; Biogeochemistry of the compost bioreactor components of a composite acid mine drainage passive remediation system. Sci Total Environ 338:81–93 [CrossRef]
   [Google Scholar]
10. Katayama Y., Uchino Y., Wood A. P., Kelly D. P. 2006; Confirmation of Thiomonas delicata (formerly Thiobacillus delicatus ) as a distinct species of the genus Thiomonas Moreira and Amils 1997 with comments on some species currently assigned to the genus. Int J Syst Evol Microbiol 56:2553–2557 [CrossRef]
    [Google Scholar]
11. Katayama-Fujimura Y., Kuraishi H. 1983; Emendation of Thiobacillus perometabolis London and Rittenberg 1967. Int J Syst Bacteriol 33:650–651 [CrossRef]
    [Google Scholar]
12. Katayama-Fujimura Y., Enokizono Y., Kaneko T., Kuraishi H. 1983; Deoxyribonucleic acid homologies among species of the genus Thiobacillus . J Gen Appl Microbiol 29:287–295 [CrossRef]
    [Google Scholar]
13. Katayama-Fujimura Y., Kawashima I., Tzuzaki N., Kuraishi H. 1984; Physiological characteristics of the facultatively chemolithotrophic Thiobacillus species Thiobacillus delicatus nom. rev., emend., Thiobacillus perometabolis , and Thiobacillus intermedius . Int J Syst Bacteriol 34:139–144 [CrossRef]
    [Google Scholar]
14. Kelly D. P., Harrison A. H. 1989; Genus Thiobacillus . In Bergey's Manual of Systematic Bacteriology vol 3 pp 1842–1858 Edited by Staley J. T., Bryant M. P., Pfennig N., Holt J. G. Baltimore: Williams & Wilkins;
    [Google Scholar]
15. Kelly D. P., Wood A. P. 2005; Genus incertae sedis XVIII. Thiomonas Moreira and Amils 1997. In Bergey's Manual of Systematic Bacteriology , 2nd edn. vol 2 part C pp 757–759 Edited by Brenner D. J., Krieg N. R., Staley J. T., Garrity G. M. New York: Springer;
    [Google Scholar]
16. Kelly D. P., Wood A. P., Stackebrandt E. 2005; Genus II. Thiobacillus Beijerinck 1904. In Bergey's Manual of Systematic Bacteriology , 2nd edn. vol 2 part C pp 764–769 Edited by Brenner D. J., Krieg N. R., Staley J. T., Garrity G. M. New York: Springer;
    [Google Scholar]
17. London J. 1963; Thiobacillus intermedius nov. sp., a novel type of facultative autotroph. Arch Mikrobiol 46:329–337 [CrossRef]
    [Google Scholar]
18. London J., Rittenberg S. C. 1967; Thiobacillus perometabolis nov. sp., a non-autotrophic Thiobacillus . Arch Mikrobiol 59:218–225 [CrossRef]
    [Google Scholar]
19. Ludwig W., Rossello-Mora R., Aznar R., Klugbauer S., Spring S., Reetz K., Beimfohr C., Brockmann E., Kirchhof G. other authors 1995; Comparative sequence analysis of 23S rRNA from Proteobacteria . Syst Appl Microbiol 18:164–188 [CrossRef]
    [Google Scholar]
20. Marin I., Amils R., Abad J. P. 1997; Genomic organization of the metal-mobilizing bacterium Thiobacillus cuprinus . Gene 187:99–105 [CrossRef]
    [Google Scholar]
21. Mizoguchi T., Sato T., Okabe T. 1976; New sulfur-oxidizing bacteria capable of growing heterotrophically, Thiobacillus rubellus nov. sp. and Thiobacillus delicatus nov. sp. J Ferment Technol 54:181–191
    [Google Scholar]
22. Moreira D., Amils R. 1996; PCR-mediated detection of the chemolithotrophic bacterium Thiomonas cuprina using 23S rDNA and 16S/23S intergenic spacer region-targeted oligonucleotide primers. FEMS Microbiol Lett 142:289–293 [CrossRef]
    [Google Scholar]
23. Moreira D., Amils R. 1997; Phylogeny of Thiobacillus cuprinus and other mixotrophic thiobacilli: proposal for Thiomonas gen. nov. Int J Syst Bacteriol 47:522–528 [CrossRef]
    [Google Scholar]
24. Moreira D., Amils R., Marin I. 1994; Complete primary structure of the 23S rRNA coding gene from Thiobacillus cuprinus and its similarity with that of Burkholderia cepacia . Syst Appl Microbiol 17:481–483
    [Google Scholar]
25. Pol A., van der Drift C., Op den Camp H. J. M. 2007; Isolation of a carbon disulfide utilizing Thiomonas sp. and its application in a biotrickling filter. Appl Microbiol Biotechnol 74:439–446 [CrossRef]
    [Google Scholar]
26. Shooner F., Bousquet J., Tyagi R. D. 1996; Isolation, phenotypic characterization, and phylogenetic position of a novel, facultatively autotrophic, moderately thermophilic bacterium, Thiobacillus thermosulfatus sp. nov. Int J Syst Bacteriol 46:409–415 [CrossRef]
    [Google Scholar]