1887

Abstract

A taxonomic study of a novel marine, heterotrophic, non-gliding, halotolerant and light-pink-pigmented bacterium was carried out using a polyphasic approach. 16S rRNA gene sequence analysis revealed that strain KMM 6241 is a member of the phylum Strain KMM 6241 formed a cluster with the genera , and with sequence similarities of 94.0–98.2 %. was the closest relative of the novel isolate. Comparative analysis of phenotypic, chemotaxonomic and genotypic characteristics of strain KMM 6241 and representatives of the genera , and revealed many similar features. Consequently, phylogenetic evidence supported by phenotypic and genotypic similarities support the transfer of members of the genera and to the genus and the establishment of a novel species, sp. nov., with strain KMM 6241 (=DSM 17529=KCTC 12716) as the type strain.

Loading

Article metrics loading...

/content/journal/ijsem/10.1099/ijs.0.65073-0
2007-09-01
2024-10-10
Loading full text...

Full text loading...

/deliver/fulltext/ijsem/57/9/1988.html?itemId=/content/journal/ijsem/10.1099/ijs.0.65073-0&mimeType=html&fmt=ahah

References

  1. Ahmed I., Yokota A., Fujiwara T. 2007; Chimaereicella boritolerans sp. nov., a boron-tolerant and alkaliphilic bacterium of the family Flavobacteriaceae isolated from soil. Int J Syst Evol Microbiol 57:986–992 [CrossRef]
    [Google Scholar]
  2. Bowman J. P., Nichols C. M., Gibson J. A. E. 2003 Algoriphagus ratkowskyi gen. nov., sp. nov., Brumimicrobium glaciale gen. nov., sp. nov., Cryomorpha ignava gen. nov., sp. nov. and Crocinitomix catalasitica gen. nov., sp. nov., novel flavobacteria isolated from various polar habitats. Int J Syst Evol Microbiol 53, 1343–1355 [CrossRef]
  3. Felsenstein J. 1993 phylip (phylogeny inference package), version 3.5c. Distributed by the author. Department of Genome Sciences University of Washington; Seattle, USA:
    [Google Scholar]
  4. Grimont P. A. D., Popoff M. Y., Grimont F., Coynault C., Lemelin M. 1980; Reproducibility and correlation study of three deoxyribonucleic acid hybridization procedures. Curr Microbiol 4:325–330 [CrossRef]
    [Google Scholar]
  5. Jukes T. H., Cantor C. R. 1969; Evolution of protein molecules. In Mammalian Protein Metabolism vol. 3 pp 21–132 Edited by Munro H. N. New York: Academic Press;
    [Google Scholar]
  6. Kim S. B., Falconer C., Williams E., Goodfellow M. 1998; Streptomyces thermocarboxydovorans sp. nov. and Streptomyces thermocarboxydus sp. nov., two moderately thermophilic carboxydotrophic species from soil. Int J Syst Bacteriol 48:59–68 [CrossRef]
    [Google Scholar]
  7. Kluge A. G., Farris F. S. 1969; Quantitative phyletics and the evolution of anurans. Syst Zool 18:1–32 [CrossRef]
    [Google Scholar]
  8. Marmur J. 1961; A procedure for the isolation of deoxyribonucleic acid from microorganisms. J Mol Biol 3:208–218 [CrossRef]
    [Google Scholar]
  9. Marmur J., Doty P. 1962; Determination of the base composition of deoxyribonucleic acid from its thermal denaturation temperature. J Mol Biol 5:109–118 [CrossRef]
    [Google Scholar]
  10. Nedashkovskaya O. I., Vancanneyt M., Van Trappen S., Vandemeulebroecke K., Lysenko A. M., Rohde M., Falsen E., Frolova G. M., Mikhailov V. V., Swings J. 2004; Description of Algoriphagus aquimarinus sp. nov., Algoriphagus chordae sp. nov. and Algoriphagus winogradskyi sp. nov., from sea water and algae, transfer of Hongiella halophila Yi and Chun 2004 to the genus Algoriphagus as Algoriphagus halophilus comb. nov. and emended descriptions of the genera Algoriphagus Bowman et al . 2003 and Hongiella Yi and Chun 2004. Int J Syst Evol Microbiol 54:1757–1764 [CrossRef]
    [Google Scholar]
  11. Nedashkovskaya O. I., Kim S. B., Vancanneyt M., Lysenko A. M., Shin D. S., Park M. S., Lee K. H., Jung W. J., Mikhailov V. V. other authors 2006; Echinicola pacifica gen. nov., sp. nov., a novel flexibacterium isolated from the sea urchin Strongylocentrotus intermedius . Int J Syst Evol Microbiol 56:953–958 [CrossRef]
    [Google Scholar]
  12. Saitou N., Nei M. 1987; The neighbor-joining method: a new method for reconstructing phylogenetic trees. Mol Biol Evol 4:406–425
    [Google Scholar]
  13. Tiago I., Mendes V., Pires C., Morais P. V., Veríssimo A. 2006; Chimaereicella alkaliphila gen. nov., sp. nov. a Gram-negative alkaliphilic bacterium isolated from a nonsaline alkaline groundwater. Syst Appl Microbiol 29:100–108 [CrossRef]
    [Google Scholar]
  14. Van Trappen S., Vandecandelaere I., Mergaert J., Swings J. 2004; Algoriphagus antarcticus sp. nov., a novel psychrophile from microbial mats in Antarctic lakes. Int J Syst Evol Microbiol 54:1969–1973 [CrossRef]
    [Google Scholar]
  15. Wayne L. G., Brenner D. J., Colwell R. R., Grimont P. A. D., Kandler O., Krichevsky M. I., Moore L. H., Moore W. E. C., Murray R. G. E. other authors 1987; International Committee on Systematic Bacteriology. Report of the ad hoc committee on reconciliation of approaches to bacterial systematics. Int J Syst Bacteriol 37:463–464 [CrossRef]
    [Google Scholar]
  16. Yi H., Chun J. 2004; Hongiella mannitolivorans gen. nov., sp. nov., Hongiella halophila sp. nov. and Hongiella ornithinivorans sp. nov., isolated from tidal flat sediment. Int J Syst Evol Microbiol 54:157–162 [CrossRef]
    [Google Scholar]
  17. Yoon J.-H., Yeo S.-H., Oh T.-K. 2004; Hongiella marincola sp. nov., isolated from sea water of the East Sea in Korea. Int J Syst Evol Microbiol 54:1845–1848 [CrossRef]
    [Google Scholar]
  18. Yoon J.-H., Kang S.-J., Jung S.-Y., Lee C.-H., Oh T.-K. 2005a; Algoriphagus yeomjeoni sp. nov., isolated from a marine solar saltern in the Yellow Sea, Korea. Int J Syst Evol Microbiol 55:865–870 [CrossRef]
    [Google Scholar]
  19. Yoon J.-H., Kang S.-J., Oh T.-K. 2005b; Algoriphagus locisalis sp. nov., isolated from a marine solar saltern. Int J Syst Evol Microbiol 55:1635–1639 [CrossRef]
    [Google Scholar]
  20. Yoon J.-H., Lee M.-H., Kang S.-J., Oh T.-K. 2006; Algoriphagus terrigena sp. nov., isolated from soil. Int J Syst Evol Microbiol 56:777–780 [CrossRef]
    [Google Scholar]
/content/journal/ijsem/10.1099/ijs.0.65073-0
Loading
/content/journal/ijsem/10.1099/ijs.0.65073-0
Loading

Data & Media loading...

This is a required field
Please enter a valid email address
Approval was a Success
Invalid data
An Error Occurred
Approval was partially successful, following selected items could not be processed due to error