Rhodoplanes oryzae sp. nov., a phototrophic alphaproteobacterium isolated from the rhizosphere soil of paddy

References

1. Chakravarthy S. K., Ramaprasad E. V. V., Shobha E., Sasikala Ch., Ramana Ch. V. ( 2012 ). Rhodoplanes piscinae sp. nov. isolated from pond water. . Int J Syst Evol Microbiol 62, 2828–2834. [View Article] [PubMed]
   [Google Scholar]
2. Hanada S., Takaichi S., Matsuura K., Nakamura K. ( 2002 ). Roseiflexus castenholzii gen. nov., sp. nov., a thermophilic, filamentous, photosynthetic bacterium that lacks chlorosomes. . Int J Syst Evol Microbiol 52, 187–193.[PubMed] [CrossRef]
   [Google Scholar]
3. Hiraishi A., Hoshino Y. ( 1984 ). Distribution of rhodoquinone in Rhodospirillaceae and its taxonomic implications. . J Gen Appl Microbiol 30, 435–448. [View Article]
   [Google Scholar]
4. Hiraishi A., Ueda Y. ( 1994 ). Rhodoplanes gen. nov., a new genus of phototrophic bacteria including Rhodopseudomonas rosea as Rhodoplanes roseus comb. nov. and Rhodoplanes elegans sp. nov.. Int J Syst Bacteriol 44, 665–673. [View Article]
   [Google Scholar]
5. Hiraishi A., Hoshino Y., Kitamura H. ( 1984 ). Isoprenoid quinone composition in the classification of Rhodospirillaceae . . J Gen Appl Microbiol 30, 197–210. [View Article]
   [Google Scholar]
6. Imhoff J. F. ( 1984 ). Quinones of phototrophic purple bacteria. . FEMS Microbiol Lett 25, 85–89. [View Article]
   [Google Scholar]
7. Imhoff J. F. ( 1991 ). Polar lipids and fatty acids in the genus Rhodobacter . . Syst Appl Microbiol 14, 228–234. [View Article]
   [Google Scholar]
8. Kates M. ( 1972 ). Techniques of Lipidology. New York:: Elsevier;.
   [Google Scholar]
9. Kates M. ( 1986 ). Techniques of Lipidology: Isolation, Analysis, and Identification of lipids. Amsterdam:: Elsevier;.
   [Google Scholar]
10. Kim O. S., Cho Y. J., Lee K., Yoon S. H., Kim M., Na H., Park S. C., Jeon Y. S., Lee J. H. & other authors ( 2012 ). Introducing EzTaxon-e: a prokaryotic 16S rRNA gene sequence database with phylotypes that represent uncultured species. . Int J Syst Evol Microbiol 62, 716–721. [View Article] [PubMed]
    [Google Scholar]
11. Kimura M. ( 1980 ). A simple method for estimating evolutionary rates of base substitutions through comparative studies of nucleotide sequences. . J Mol Evol 16, 111–120. [View Article] [PubMed]
    [Google Scholar]
12. Lakshmi K. V. N. S., Sasikala Ch., Ramana Ch. V. ( 2009 ). Rhodoplanes pokkaliisoli sp. nov., a phototrophic alphaproteobacterium isolated from a waterlogged brackish paddy soil. . Int J Syst Evol Microbiol 59, 2153–2157. [View Article] [PubMed]
    [Google Scholar]
13. Marmur J. ( 1961 ). A procedure for the isolation of deoxyribonucleic acid from microorganisms. . J Mol Biol 3, 208–218. [View Article]
    [Google Scholar]
14. Mesbah M., Premachandran U., Whitman W. B. ( 1989 ). Precise measurement of the G+C content of deoxyribonucleic acid by high performance liquid chromatography. . Int J Syst Bacteriol 39, 159–167. [View Article]
    [Google Scholar]
15. Okamura K., Hisada T., Hiraishi A. ( 2007 ). Characterization of thermotolerant purple nonsulfur bacteria isolated from hot-spring Chloroflexus mats and the reclassification of “Rhodopseudomonas cryptolactis” Stadtwald-Demchick et al. 1990 as Rhodoplanes cryptolactis nom. rev., comb. nov.. J Gen Appl Microbiol 53, 357–361. [View Article] [PubMed]
    [Google Scholar]
16. Oren A., Duker S., Ritter S. ( 1996 ). The polar lipid composition of Walsby’s square bacterium. . FEMS Microbiol Lett 138, 135–140. [View Article]
    [Google Scholar]
17. Sasser M. ( 1990 ). Identification of bacteria by gas chromatography of cellular fatty acids, MIDI Technical Note 101. . Newark, DE:: MIDI Inc;.
    [Google Scholar]
18. Srinivas T. N. R., Kumar P. A., Sasikala Ch., Ramana Ch. V. ( 2007 ). Rhodovulum imhoffii sp. nov.. Int J Syst Evol Microbiol 57, 228–232. [View Article] [PubMed]
    [Google Scholar]
19. Stackebrandt E., Ebers J. ( 2006 ). Taxonomic parameters revisited: tarnished gold standards. . Microbiol Today 3, 152–155.
    [Google Scholar]
20. Stackebrandt E., Goebel B. M. ( 1994 ). A place for DNA–DNA reassociation and 16S rRNA sequence analysis in the present species definition in bacteriology. . Int J Syst Bacteriol 44, 846–849. [View Article]
    [Google Scholar]
21. Subhash Y., Tushar L., Sasikala Ch., Ramana Ch. V. ( 2013a ). Erythrobacter odishensis sp. nov. and Pontibacter odishensis sp. nov. isolated from dry soil of a solar saltern. . Int J Syst Evol Microbiol 63, 4524–4532. [View Article] [PubMed]
    [Google Scholar]
22. Subhash Y., Sasikala Ch., Ramana Ch. V. ( 2013b ). Flavobacterium aquaticum sp. nov., isolated from a water sample of a rice field. . Int J Syst Evol Microbiol 63, 3463–3469. [View Article] [PubMed]
    [Google Scholar]
23. Tamura K., Peterson D., Peterson N., Stecher G., Nei M., Kumar S. ( 2011 ). mega5: molecular evolutionary genetics analysis using maximum likelihood, evolutionary distance, and maximum parsimony methods. . Mol Biol Evol 28, 2731–2739. [View Article] [PubMed]
    [Google Scholar]
24. Tindall B. J. ( 1990a ). Lipid composition of Halobacterium lacusprofundi . . FEMS Microbiol Lett 66, 199–202. [View Article]
    [Google Scholar]
25. Tindall B. J. ( 1990b ). A comparative study of the lipid composition of Halobacterium saccharovorum from various sources. . Syst Appl Microbiol 13, 128–130. [View Article]
    [Google Scholar]
26. Trüper H. G., Pfennig N. ( 1981 ). Isolation of members of the families Chromatiaceae and Chlorobiaceae . . In The Prokaryotes: a Handbook on Habitats, Isolation, and Identification of Bacteria, pp. 279–289. Edited by Starr M. P., Stolp H. , Trüper H. G., Balows A., Schlegel H. G. . Berlin:: Springer;.
    [Google Scholar]