1887

Abstract

A non-motile, yellow–orange-pigmented bacterial strain, designated HME6664, was isolated from Lake Soyang, Republic of Korea. The major fatty acids of strain HME6664 were summed feature 3 (comprising Cω6 and/or Cω7; 44.7 %) and iso-C (20.2 %). The DNA G+C content was 40.8 mol%. A phylogenetic tree based on 16S rRNA gene sequences showed that strain HME6664 formed a lineage within the genus . Strain HME6664 was closely related to (96.7 %), (96.5 %) and (96.3 %). On the basis of the evidence presented in this study, strain HME6664 represents a novel species of the genus , for which the name sp. nov., is proposed. The type strain is HME6664 ( = KCTC 23261 = CECT 7824).

Funding
This study was supported by the:
  • , National Institute of Biological Resources (NIBR)
  • , Ministry of Environment (MOE) of the Republic of Korea , (Award 2013-02-001)
Loading

Article metrics loading...

/content/journal/ijsem/10.1099/ijs.0.055129-0
2014-02-01
2020-11-23
Loading full text...

Full text loading...

/deliver/fulltext/ijsem/64/2/413.html?itemId=/content/journal/ijsem/10.1099/ijs.0.055129-0&mimeType=html&fmt=ahah

References

  1. An D. S., Yin C. R., Lee S. T., Cho C. H. ( 2009 ). Mucilaginibacter daejeonensis sp. nov., isolated from dried rice straw. . Int J Syst Evol Microbiol 59, 11221125. [CrossRef] [PubMed]
    [Google Scholar]
  2. Baik K. S., Park S. C., Kim E. M., Lim C. H., Seong C. N. ( 2010 ). Mucilaginibacter rigui sp. nov., isolated from wetland freshwater, and emended description of the genus Mucilaginibacter . . Int J Syst Evol Microbiol 60, 134139. [CrossRef] [PubMed]
    [Google Scholar]
  3. Bernardet J.-F., Vancanneyt M., Matte-Tailliez O., Grisez L., Tailliez P., Bizet C., Nowakowski M., Kerouault B., Swings J. ( 2005 ). Polyphasic study of Chryseobacterium strains isolated from diseased aquatic animals. . Syst Appl Microbiol 28, 640660. [CrossRef] [PubMed]
    [Google Scholar]
  4. Cui C. H., Choi T. E., Yu H., Jin F., Lee S. T., Kim S. C., Im W. T. ( 2011 ). Mucilaginibacter composti sp. nov., with ginsenoside converting activity, isolated from compost. . J Microbiol 49, 393398. [CrossRef] [PubMed]
    [Google Scholar]
  5. Fautz E., Reichenbach H. ( 1980 ). A simple test for flexirubin-type pigments. . FEMS Microbiol Lett 8, 8791. [CrossRef]
    [Google Scholar]
  6. Felsenstein J. ( 1981 ). Evolutionary trees from DNA sequences: a maximum likelihood approach. . J Mol Evol 17, 368376. [CrossRef] [PubMed]
    [Google Scholar]
  7. Felsenstein J. ( 1985 ). Confidence limits on phylogenies: an approach using the bootstrap. . 39 , 783791.
    [Google Scholar]
  8. Fitch W. M. ( 1971 ). Toward defining the course of evolution: minimum change for a specific tree topology. . 20 , 406416.
    [Google Scholar]
  9. Gonzalez J. M., Saiz-Jimenez C. ( 2002 ). A fluorimetric method for the estimation of G+C mol% content in microorganisms by thermal denaturation temperature. . Environ Microbiol 4, 770773. [CrossRef] [PubMed]
    [Google Scholar]
  10. Han S. I., Lee H. J., Lee H. R., Kim K. K., Whang K. S. ( 2012 ). Mucilaginibacter polysacchareus sp. nov., an exopolysaccharide-producing bacterial species isolated from the rhizoplane of the herb Angelica sinensis . . Int J Syst Evol Microbiol 62, 632637. [CrossRef] [PubMed]
    [Google Scholar]
  11. Jeon Y., Lee S. S., Chung B. S., Kim J. M., Bae J. W., Park S. K., Jeon C. O. ( 2009 ). Mucilaginibacter oryzae sp. nov., isolated from soil of a rice paddy. . Int J Syst Evol Microbiol 59, 14511454. [CrossRef] [PubMed]
    [Google Scholar]
  12. Jiang F., Dai J., Wang Y., Xue X., Xu M., Guo Y., Li W., Fang C., Peng F. ( 2012 ). Mucilaginibacter soli sp. nov., isolated from Arctic tundra soil. . Int J Syst Evol Microbiol 62, 16301635. [CrossRef] [PubMed]
    [Google Scholar]
  13. Joung Y., Joh K. ( 2011 ). Mucilaginibacter myungsuensis sp. nov., isolated from a mesotrophic artificial lake. . Int J Syst Evol Microbiol 61, 15061510. [CrossRef] [PubMed]
    [Google Scholar]
  14. Kang S. J., Jung Y. T., Oh K. H., Oh T. K., Yoon J. H. ( 2011 ). Mucilaginibacter boryungensis sp. nov., isolated from soil. . Int J Syst Evol Microbiol 61, 15491553. [CrossRef] [PubMed]
    [Google Scholar]
  15. Khan H., Chung E. J., Kang D. Y., Jeon C. O., Chung Y. R. ( 2013 ). Mucilaginibacter jinjuensis sp. nov., with xylan-degrading activity. . Int J Syst Evol Microbiol 63, 12671272. [CrossRef] [PubMed]
    [Google Scholar]
  16. Kim B. C., Lee K. H., Kim M. N., Lee J., Shin K. S. ( 2010 ). Mucilaginibacter dorajii sp. nov., isolated from the rhizosphere of Platycodon grandiflorum . . FEMS Microbiol Lett 309, 130135.[PubMed]
    [Google Scholar]
  17. Kim B. C., Poo H., Lee K. H., Kim M. N., Kwon O. Y., Shin K. S. ( 2012a ). Mucilaginibacter angelicae sp. nov., isolated from the rhizosphere of Angelica polymorpha Maxim. . Int J Syst Evol Microbiol 62, 5560. [CrossRef] [PubMed]
    [Google Scholar]
  18. Kim J. H., Kang S. J., Jung Y. T., Oh T. K., Yoon J. H. ( 2012b ). Mucilaginibacter lutimaris sp. nov., isolated from a tidal flat sediment. . Int J Syst Evol Microbiol 62, 515519. [CrossRef] [PubMed]
    [Google Scholar]
  19. Kim O. S., Cho Y. J., Lee K., Yoon S. H., Kim M., Na H., Park S. C., Jeon Y. S., Lee J. H. & other authors ( 2012c ). Introducing EzTaxon-e: a prokaryotic 16S rRNA gene sequence database with phylotypes that represent uncultured species. . Int J Syst Evol Microbiol 62, 716721. [CrossRef] [PubMed]
    [Google Scholar]
  20. Luo X., Zhang L., Dai J., Liu M., Zhang K., An H., Fang C. ( 2009 ). Mucilaginibacter ximonensis sp. nov., isolated from Tibetan soil. . Int J Syst Evol Microbiol 59, 14471450. [CrossRef] [PubMed]
    [Google Scholar]
  21. MacFaddin J. F. ( 1980 ). Biochemical Tests for Identification of Medical Bacteria, , 2nd edn.. Baltimore, MD:: Williams & Wilkins;.
    [Google Scholar]
  22. Madhaiyan M., Poonguzhali S., Lee J. S., Senthilkumar M., Lee K. C., Sundaram S. ( 2010 ). Mucilaginibacter gossypii sp. nov. and Mucilaginibacter gossypiicola sp. nov., plant-growth-promoting bacteria isolated from cotton rhizosphere soils. . Int J Syst Evol Microbiol 60, 24512457. [CrossRef] [PubMed]
    [Google Scholar]
  23. Männistö M. K., Tiirola M., McConnell J., Häggblom M. M. ( 2010 ). Mucilaginibacter frigoritolerans sp. nov., Mucilaginibacter lappiensis sp. nov. and Mucilaginibacter mallensis sp. nov., isolated from soil and lichen samples. . Int J Syst Evol Microbiol 60, 28492856. [CrossRef] [PubMed]
    [Google Scholar]
  24. Pankratov T. A., Tindall B. J., Liesack W., Dedysh S. N. ( 2007 ). Mucilaginibacter paludis gen. nov., sp. nov. and Mucilaginibacter gracilis sp. nov., pectin-, xylan- and laminarin-degrading members of the family Sphingobacteriaceae from acidic Sphagnum peat bog. . Int J Syst Evol Microbiol 57, 23492354. [CrossRef] [PubMed]
    [Google Scholar]
  25. Saitou N., Nei M. ( 1987 ). The neighbor-joining method: a new method for reconstructing phylogenetic trees. . Mol Biol Evol 4, 406425.[PubMed]
    [Google Scholar]
  26. Sasser M. ( 1990 ). Identification of bacteria by gas chromatography of cellular fatty acids. MIDI Technical Note 101. . Newark, DE:: MIDI Inc.;
  27. Tamura K., Peterson D., Peterson N., Stecher G., Nei M., Kumar S. ( 2011 ). mega5: molecular evolutionary genetics analysis using maximum likelihood, evolutionary distance, and maximum parsimony methods. . Mol Biol Evol 28, 27312739. [CrossRef] [PubMed]
    [Google Scholar]
  28. Urai M., Aizawa T., Nakagawa Y., Nakajima M., Sunairi M. ( 2008 ). Mucilaginibacter kameinonensis sp., nov., isolated from garden soil. . Int J Syst Evol Microbiol 58, 20462050. [CrossRef] [PubMed]
    [Google Scholar]
  29. Wayne L. G., Brenner D. J., Colwell R. R., Grimont P. A. D., Kandler O., Krichevsky M. I., Moore L. H., Moore W. E. C., Murray R. G. E. & other authors ( 1987 ). International Committee on Systematic Bacteriology. Report of the ad hoc committee on reconciliation of approaches to bacterial systematics. . 37 , 463464.
    [Google Scholar]
  30. Yoon J. H., Kang S. J., Park S., Oh T. K. ( 2012 ). Mucilaginibacter litoreus sp. nov., isolated from marine sand. . Int J Syst Evol Microbiol 62, 28222827. [CrossRef] [PubMed]
    [Google Scholar]
http://instance.metastore.ingenta.com/content/journal/ijsem/10.1099/ijs.0.055129-0
Loading
/content/journal/ijsem/10.1099/ijs.0.055129-0
Loading

Data & Media loading...

Most cited this month Most Cited RSS feed

This is a required field
Please enter a valid email address
Approval was a Success
Invalid data
An Error Occurred
Approval was partially successful, following selected items could not be processed due to error