1887

Abstract

A Gram-stain-negative, aerobic, motile with one polar flagellum γ-proteobacterium, designated strain SBZ3-12, was isolated from surfaces of weathered potassic trachyte. Phylogenetic analysis of this strain based on 16S rRNA gene sequences showed that it was most closely related to XD53 (97.9 % 16S rRNA gene sequence similarity), JS14-6 (97.7 %), JS12-10 (97.5 %) and BB4 (97.0 %). The DNA G+C content of strain SBZ3-12 was 64.0 mol%. In addition, iso-Cω9, iso-C and iso-C were the major cellular fatty acids and ubiquinone Q-8 was the predominant respiratory quinone. The low DNA–DNA relatedness values between strain SBZ3-12 and recognized species of the genus and the many phenotypic properties supported the classification of strain SBZ3-12 as a representative of a novel species of the genus , for which the name sp. nov. is proposed. The type strain is SBZ3-12 ( = CCTCC AB 2012160 = KACC 16539 = DSM 26119).

Loading

Article metrics loading...

/content/journal/ijsem/10.1099/ijs.0.048470-0
2013-09-01
2020-01-24
Loading full text...

Full text loading...

/deliver/fulltext/ijsem/63/9/3154.html?itemId=/content/journal/ijsem/10.1099/ijs.0.048470-0&mimeType=html&fmt=ahah

References

  1. An D. S., Im W. T., Yang H. C., Yang D. C., Lee S. T.. ( 2005;). Dyella koreensis sp. nov., a β-glucosidase-producing bacterium. . Int J Syst Evol Microbiol 55:, 1625–1628. [CrossRef][PubMed]
    [Google Scholar]
  2. Anandham R., Kwon S. W., Indira Gandhi P., Kim S. J., Weon H. Y., Kim Y. S., Sa T. M., Kim Y. K., Jee H. J.. ( 2011;). Dyella thiooxydans sp. nov., a facultatively chemolithotrophic, thiosulfate-oxidizing bacterium isolated from rhizosphere soil of sunflower (Helianthus annuus L.). . Int J Syst Evol Microbiol 61:, 392–398. [CrossRef][PubMed]
    [Google Scholar]
  3. De Ley J., Cattoir H., Reynaerts A.. ( 1970;). The quantitative measurement of DNA hybridization from renaturation rates. . Eur J Biochem 12:, 133–142. [CrossRef][PubMed]
    [Google Scholar]
  4. Jung H. M., Ten L. N., Kim K. H., An D. S., Im W. T., Lee S. T.. ( 2009;). Dyella ginsengisoli sp. nov., isolated from soil of a ginseng field in South Korea. . Int J Syst Evol Microbiol 59:, 460–465. [CrossRef][PubMed]
    [Google Scholar]
  5. Kim O. S., Cho Y. J., Lee K., Yoon S. H., Kim M., Na H., Park S. C., Jeon Y. S., Lee J. H.. & other authors ( 2012;). Introducing EzTaxon-e: a prokaryotic 16S rRNA gene sequence database with phylotypes that represent uncultured species. . Int J Syst Evol Microbiol 62:, 716–721. [CrossRef][PubMed]
    [Google Scholar]
  6. Komagata K., Suzuki K.. ( 1987;). Lipid and cell-wall analysis in bacterial systematics. . Methods Microbiol 19:, 161–207. [CrossRef]
    [Google Scholar]
  7. Lee D. W., Lee S. D.. ( 2009;). Dyella marensis sp. nov., isolated from cliff soil. . Int J Syst Evol Microbiol 59:, 1397–1400. [CrossRef][PubMed]
    [Google Scholar]
  8. Mesbah M., Premachandran U., Whitman W. B.. ( 1989;). Precise measurement of the G+C content of deoxyribonucleic acid by high performance liquid chromatography. . Int J Syst Bacteriol 39:, 159–167. [CrossRef]
    [Google Scholar]
  9. Sasser M.. ( 1990;). Identification of bacteria by gas chromatography of cellular fatty acids, MIDI Technical Note 101. . Newark, DE:: MIDI Inc.;
  10. Stackebrandt E., Goebel B. M.. ( 1994;). Taxonomic note: a place for DNA-DNA reassociation and 16S rRNA sequence analysis in the present species definition in bacteriology. . Int J Syst Bacteriol 44:, 846–849. [CrossRef]
    [Google Scholar]
  11. Timke M., Wang-Lieu N. Q., Altendorf K., Lipski A.. ( 2005;). Community structure and diversity of biofilms from a beer bottling plant as revealed using 16S rRNA gene clone libraries. . Appl Environ Microbiol 71:, 6446–6452. [CrossRef][PubMed]
    [Google Scholar]
  12. Wayne L. G., Brenner D. J., Colwell R. R., Grimont P. A. D., Kandler O., Krichevsky M. I., Moore L. H., Moore W. E. C., Murray R. G. E.. & other authors ( 1987;). International Committee on Systematic Bacteriology. Report of the ad hoc committee on reconciliation of approaches to bacterial systematics. . Int J Syst Bacteriol 37:, 463–464. [CrossRef]
    [Google Scholar]
  13. Weon H. Y., Anandham R., Kim B. Y., Hong S. B., Jeon Y. A., Kwon S. W.. ( 2009;). Dyella soli sp. nov. and Dyella terrae sp. nov., isolated from soil. . Int J Syst Evol Microbiol 59:, 1685–1690. [CrossRef][PubMed]
    [Google Scholar]
  14. Xie C. H., Yokota A.. ( 2005;). Dyella japonica gen. nov., sp. nov., a γ-proteobacterium isolated from soil. . Int J Syst Evol Microbiol 55:, 753–756. [CrossRef][PubMed]
    [Google Scholar]
http://instance.metastore.ingenta.com/content/journal/ijsem/10.1099/ijs.0.048470-0
Loading
/content/journal/ijsem/10.1099/ijs.0.048470-0
Loading

Data & Media loading...

Most cited articles

This is a required field
Please enter a valid email address
Approval was a Success
Invalid data
An Error Occurred
Approval was partially successful, following selected items could not be processed due to error