1887

International Journal of Systematic and Evolutionary Microbiology

Volume 63, Issue 1

sp. nov., isolated from the sea urchin Free

Abstract

An aerobic, halotolerant, Gram-negative bacterium was isolated from the sea urchin and subjected to taxonomic characterization. The strain, designated KMM 6042, was rod-shaped, motile and yellow-pigmented. Phylogenetic analysis indicated that the strain was most closely related to the type strain of , and the level of 16S rRNA gene sequence similarity between the two was 99.0 %. However, the DNA–DNA relatedness between the two strains was 34.4±7.6 %. Physiological and chemotaxonomic properties clearly distinguished the novel strain from other species of the genus . It is thus evident from the phylogenetic and phenotypic analyses that strain KMM 6042 merits recognition as a novel species of the genus , for which the name sp. nov. (type strain, KMM 6042 = KCTC 12303 = JCM 17037) is proposed.

  • Published Online:
© 2013 IUMS
Loading

Article metrics loading...

/content/journal/ijsem/10.1099/ijs.0.038836-0
2013-01-01
2020-01-22
Loading full text...

Full text loading...

/deliver/fulltext/ijsem/63/1/93.html?itemId=/content/journal/ijsem/10.1099/ijs.0.038836-0&mimeType=html&fmt=ahah

References

  1. Ezaki T., Hashimoto Y., Yabuuchi E.. ( 1989;). Fluorometric deoxyribonucleic acid-deoxyribonucleic acid hybridization in microdilution wells as an alternative to membrane filter hybridization in which radioisotopes are used to determine genetic relatedness among bacterial strains. . Int J Syst Bacteriol 39:, 224––229. [CrossRef]
     [Google Scholar]
  2. Fan Z. Y., Xiao Y. P., Hui W., Tian G. R., Lee J. S., Lee K. C., Quan Z. X.. ( 2011;). Altererythrobacter dongtanensis sp. nov., isolated from a tidal flat. . Int J Syst Evol Microbiol 61:, 2035––2039. [CrossRef][PubMed]
     [Google Scholar]
  3. Han S. K., Nedashkovskaya O. I., Mikhailov V. V., Kim S. B., Bae K. S.. ( 2003;). Salinibacterium amurskyense gen. nov., sp. nov., a novel genus of the family Microbacteriaceae from the marine environment. . Int J Syst Evol Microbiol 53:, 2061––2066. [CrossRef][PubMed]
     [Google Scholar]
  4. Kim S. B., Falconer C., Williams E., Goodfellow M.. ( 1998;). Streptomyces thermocarboxydovorans sp. nov. and Streptomyces thermocarboxydus sp. nov., two moderately thermophilic carboxydotrophic species from soil. . Int J Syst Bacteriol 48:, 59––68. [CrossRef][PubMed]
     [Google Scholar]
  5. Kumar N. R., Nair S., Langer S., Busse H.-J., Kämpfer P.. ( 2008;). Altererythrobacter indicus sp. nov., isolated from wild rice (Porteresia coarctata Tateoka). . Int J Syst Evol Microbiol 58:, 839––844. [CrossRef][PubMed]
     [Google Scholar]
  6. Kwon K. K., Woo J. H., Yang S. H., Kang J. H., Kang S. G., Kim S. J., Sato T., Kato C.. ( 2007;). Altererythrobacter epoxidivorans gen. nov., sp. nov., an epoxide hydrolase-active, mesophilic marine bacterium isolated from cold-seep sediment, and reclassification of Erythrobacter luteolus Yoon et al. 2005 as Altererythrobacter luteolus comb. nov.. Int J Syst Evol Microbiol 57:, 2207––2211. [CrossRef][PubMed]
     [Google Scholar]
  7. Lai Q. L., Yuan J., Shao Z. Z.. ( 2009;). Altererythrobacter marinus sp. nov., isolated from deep seawater. . Int J Syst Evol Microbiol 59:, 2973––2976. [CrossRef][PubMed]
     [Google Scholar]
  8. Marmur J., Doty P.. ( 1962;). Determination of the base composition of deoxyribonucleic acid from its thermal denaturation temperature. . J Mol Biol 5:, 109––118. [CrossRef][PubMed]
     [Google Scholar]
  9. Matsumoto M., Iwama D., Arakaki A., Tanaka A., Tanaka T., Miyashita H., Matsunaga T.. ( 2011;). Altererythrobacter ishigakiensis sp. nov., an astaxanthin-producing bacterium isolated from a marine sediment. . Int J Syst Evol Microbiol 61:, 2956––2961. [CrossRef][PubMed]
     [Google Scholar]
  10. Minnikin D. E., O’Donnell A. G., Goodfellow M., Alderson G., Athalye M., Schaal A., Parlett J. H.. ( 1984;). An integrated procedure for the extraction of bacterial isoprenoid quinones and polar lipids. . J Microbiol Methods 2:, 233––241. [CrossRef]
     [Google Scholar]
  11. Nedashkovskaya O. I., Kim S. B., Bae K. S.. ( 2010;). Gramella marina sp. nov., isolated from the sea urchin Strongylocentrotus intermedius. . Int J Syst Evol Microbiol 60:, 2799––2802. [CrossRef][PubMed]
     [Google Scholar]
  12. Nishijima M., Araki-Sakai M., Sano H.. ( 1997;). Identification of isoprenoid quinones by frit-FAB liquid chromatography-mass spectrometry for the chemotaxonomy of microorganisms. . J Microbiol Methods 28:, 113––122. [CrossRef]
     [Google Scholar]
  13. Park S. C., Baik K. S., Choe H. N., Lim C. H., Kim H. J., Ka J. O., Seong C. N.. ( 2011;). Altererythrobacter namhicola sp. nov. and Altererythrobacter aestuarii sp. nov., isolated from seawater. . Int J Syst Evol Microbiol 61:, 709––715. [CrossRef][PubMed]
     [Google Scholar]
  14. Seo S. H., Lee S. D.. ( 2010;). Altererythrobacter marensis sp. nov., isolated from seawater. . Int J Syst Evol Microbiol 60:, 307––311. [CrossRef][PubMed]
     [Google Scholar]
  15. Xue X., Zhang K., Cai F., Dai J., Wang Y., Rahman E., Peng F., Fang C.. ( 2012;). Altererythrobacter xinjiangensis sp. nov., isolated from desert sand, and emended description of the genus Altererythrobacter. . Int J Syst Evol Microbiol 62:, 28––32. [CrossRef][PubMed]
     [Google Scholar]
  16. Yoon J.-H., Kang K. H., Yeo S.-H., Oh T.-K.. ( 2005;). Erythrobacter luteolus sp. nov., isolated from a tidal flat of the Yellow Sea in Korea. . Int J Syst Evol Microbiol 55:, 1167––1170. [CrossRef][PubMed]
     [Google Scholar]
http://instance.metastore.ingenta.com/content/journal/ijsem/10.1099/ijs.0.038836-0
Loading
Altererythrobacter troitsensis sp. nov., isolated from the sea urchin Strongylocentrotus intermedius
Int J Syst Evol Microbiol 63, 93 (2013); https://doi.org/10.1099/ijs.0.038836-0
/content/journal/ijsem/10.1099/ijs.0.038836-0
/content/journal/ijsem/10.1099/ijs.0.038836-0
Loading

Data & Media loading...

Supplements

Supplementary material 

PDF

Most cited articles

This is a required field
Please enter a valid email address
Approval was a Success
Invalid data
An Error Occurred
Approval was partially successful, following selected items could not be processed due to error