Shewanella affinis sp. nov., isolated from marine invertebrates

References

1. Barry A. I. 1980; Procedures and theoretical considerations for testing antimicrobial agents in agar media. In Antibiotics in Laboratory Medicine pp  10–16 Edited by Logan V. Baltimore, MD: Williams & Wilkins;
   [Google Scholar]
2. Baumann L., Baumann P., Mandel M., Allen R. D. 1972; Taxonomy of aerobic marine eubacteria. J Bacteriol 110:402–429
   [Google Scholar]
3. Bowman J. P., McCammon S. A., Nichols D. S., Skerratt J. H., Rea S. M., Nichols P. D., McMeekin T. A. 1997; Shewanella gelidimarina sp. nov. and Shewanella frigidimarina sp. nov. novel Antarctic species with the ability to produce eicosapentaenoic acid (20 : 5 ω 3) and grow anaerobically by dissimilatory Fe(III) reduction. Int J Syst Bacteriol 47:1040–1047 [CrossRef]
   [Google Scholar]
4. Bowman J. P., McCammon S. A., Brown J. L., McMeekin T. A. 1998; Glaciecola punicea gen. nov., sp. nov. and Glaciecola pallidula gen. nov., sp. nov.: psychrophilic bacteria from Antarctic sea-ice habitats. Int J Syst Bacteriol 48:1213–1222 [CrossRef]
   [Google Scholar]
5. Coyne V. E., Pillidge C. J., Sledjeski D. D., Hori H., Ortiz-Conde B. A., Muir D. G., Weiner R. M., Colwell R. R. 1989; Reclassification of Alteromonas colwelliana to the genus Shewanella by DNA-DNA hybridisation, serology and 5S ribosomal RNA sequence data. Syst Appl Microbiol 12:275–279 [CrossRef]
   [Google Scholar]
6. De Ley J., Cattoir H., Reynaerts A. 1970; The quantitative measurement of DNA hybridization from renaturation rates. Eur J Biochem 12:143–153 [CrossRef]
   [Google Scholar]
7. Felsenstein J. 1993 phylip (phylogeny inference package), version 3.5c Department of Genetics, University of Washington; Seattle, USA:
   [Google Scholar]
8. Garrity G. M., Holt J. G. 2001; The road map to the Manual. In Bergey's Manual of Systematic Bacteriology , 2nd edn. vol 1 p.  119–166 Edited by Boone D. R., Castenholz R. W. New York: Springer;
   [Google Scholar]
9. Gauthier G., Gauthier M., Christen R. 1995; Phylogenetic analysis of the genera Alteromonas , Shewanella , and Moritella using genes coding for small-subunit rRNA sequences and division of the genus Alteromonas into two genera, Alteromonas (emended) and Pseudoalteromonas gen. nov., and proposal of twelve new species combinations. Int J Syst Bacteriol 45:755–761 [CrossRef]
   [Google Scholar]
10. Ivanova E. P., Kiprianova E. A., Mikhailov V. V., Levanova G. F., Garagulya A. D., Gorshkova N. M., Yumoto N., Yoshikawa S. 1996; Characterization and identification of marine Alteromonas nigrifaciens strains and emendation of the description. Int J Syst Bacteriol 46:223–228 [CrossRef]
    [Google Scholar]
11. Ivanova E. P., Kiprianova E. A., Mikhailov V. V. 8 other authors 1998; Phenotypic diversity of Pseudoalteromonas citrea from different marine habitats and emendation of the description. Int J Syst Bacteriol 48:247–256 [CrossRef]
    [Google Scholar]
12. Ivanova E. P., Sawabe T., Gorshkova N. M., Svetashev V. I., Mikhailov V. V., Nicolau D. V., Christen R. 2001; Shewanella japonica sp. nov. Int J Syst Evol Microbiol 51:1027–1033 [CrossRef]
    [Google Scholar]
13. Ivanova E. P., Nedashkovskaya O. I., Zhukova N. V., Nicolau D. V., Christen R., Mikhailov V. V. 2003a; Shewanella waksmanii sp. nov., isolated from a sipuncula ( Phascolosoma japonicum ). Int J Syst Evol Microbiol 53:1471–1477 [CrossRef]
    [Google Scholar]
14. Ivanova E. P., Sawabe T., Zhukova N. V. 8 other authors 2003b; Occurrence and diversity of mesophilic Shewanella strains isolated from the North-West Pacific Ocean. Syst Appl Microbiol 26:293–301 [CrossRef]
    [Google Scholar]
15. MacDonell M. T., Colwell R. R. 1985; Phylogeny of the Vibrionaceae , and recommendation for two new genera, Listonella and Shewanella . Syst Appl Microbiol 6:171–182 [CrossRef]
    [Google Scholar]
16. Marmur J. 1961; A procedure for the isolation of deoxyribonucleic acid from microorganisms. J Mol Biol 3:208–218 [CrossRef]
    [Google Scholar]
17. Marmur J., Doty P. 1962; Determination of the base composition of deoxyribonucleic acid from its thermal denaturation temperature. J Mol Biol 4:109–118
    [Google Scholar]
18. Moule A. L., Wilkinson S. G. 1987; Polar lipids, fatty acids and isoprenoid quinones of Alteromonas putrefaciens ( Shewanella putrefaciens . Syst Appl Microbiol 9:192–198 [CrossRef]
    [Google Scholar]
19. Nogi Y., Kato C., Horikoshi K. 1998; Taxonomic studies of deep-sea barophilic Shewanella strains and description of Shewanella violacea sp. nov. Arch Microbiol 170:331–338 [CrossRef]
    [Google Scholar]
20. Satomi M., Oikawa H., Yano Y. 2003; Shewanella marinintestina sp. nov., Shewanella schlegeliana sp. nov. and Shewanella sairae sp. nov., novel eicosapentaenoic-acid-producing marine bacteria isolated from sea-animal intestines. Int J Syst Evol Microbiol 53:491–499 [CrossRef]
    [Google Scholar]
21. Sawabe T., Makino H., Tatsumi M., Nakano K., Tajima K., Iqbal M. M., Yumoto I., Ezura Y., Christen R. 1998; Pseudoalteromonas bacteriolytica sp. nov., a marine bacterium that is the causative agent of red spot disease of Laminaria japonica . Int J Syst Bacteriol 48:769–774 [CrossRef]
    [Google Scholar]
22. Skerratt J. H., Bowman J. P., Nichols P. D. 2002; Shewanella olleyana sp. nov., a marine species isolated from a temperate estuary which produces high levels of polyunsaturated fatty acids. Int J Syst Evol Microbiol 52:2101–2106 [CrossRef]
    [Google Scholar]
23. Smibert R. M., Krieg N. R. 1994; Phenotypic characterization. In Methods for General and Molecular Bacteriology pp  607–654 Edited by Gerhardt P., Murray R. G. E., Wood W. A., Krieg N. R. Washington, DC: American Society for Microbiology;
    [Google Scholar]
24. Stackebrandt E., Goebel B. M. 1994; Taxonomic note: a place for DNA-DNA reassociation and 16S rRNA sequence analysis in the present species definition in bacteriology. Int J Syst Bacteriol 44:846–849 [CrossRef]
    [Google Scholar]
25. Svetashev V. I., Vysotskii M. V., Ivanova E. P., Mikhailov V. V. 1995; Cellular fatty acid of Alteromonas species. Syst Appl Microbiol 18:37–43 [CrossRef]
    [Google Scholar]
26. Venkateswaran K., Moser D. P., Dollhopf M. E. 10 other authors 1999; Polyphasic taxonomy of the genus Shewanella and description of Shewanella oneidensis sp. nov. Int J Syst Bacteriol 49:705–724 [CrossRef]
    [Google Scholar]
27. Wayne L. G., Brenner D. J., Colwell R. R. 9 other authors 1987; International Committee on Systematic Bacteriology. Report of the ad hoc committee on reconciliation of approaches to bacterial systematics. Int J Syst Bacteriol 37:463–464 [CrossRef]
    [Google Scholar]
28. Weiner R. M., Coyne V. E., Brayton P., West P., Raiken S. F. 1988; Alteromonas colwelliana sp. nov., an isolate from oyster habitats. Int J Syst Bacteriol 38:240–244 [CrossRef]
    [Google Scholar]