Bacillus krulwichiae sp. nov., a halotolerant obligate alkaliphile that utilizes benzoate and m-hydroxybenzoate

References

1. Agnew M. D., Koval S. F., Jarrell K. F. 1995; Isolation and characterization of novel alkaliphiles from bauxite processing waste and description of Bacillus vedderi sp. nov., a new obligate alkaliphile. Syst Appl Microbiol 18:221–230 [CrossRef]
   [Google Scholar]
2. Aono R. 1995; Assignment of facultative alkaliphilic Bacillus sp. strain C-125 to Bacillus lentus group 3. Int J Syst Bacteriol 45:582–585 [CrossRef]
   [Google Scholar]
3. Barrow G. I., Feltham R. K. A.editors 1993 Cowan and Steel's Manual for the Identification of Medical Bacteria , 3rd edn. Cambridge: Cambridge University Press;
   [Google Scholar]
4. Brosius J., Palmer J. L., Kennedy P. J., Noller H. F. 1978; Complete nucleotide sequence of 16S ribosomal RNA gene from Escherichia coli . Proc Natl Acad Sci U S A 75:4801–4805 [CrossRef]
   [Google Scholar]
5. Clejan S., Krulwich T. A., Mondrus K. R., Seto-Young D. 1986; Membrane lipid composition of obligately and facultatively alkalophilic strains of Bacillus spp. J Bacteriol 168:334–340
   [Google Scholar]
6. Duckworth A. W., Grant W. D., Jones B. E., Steenbergen R. 1996; Phylogenetic diversity of soda lake alkaliphiles. FEMS Microbiol Lett 19:181–191 [CrossRef]
   [Google Scholar]
7. Ezaki T., Hashimoto Y., Yabuuchi E. 1989; Fluorometric deoxyribonucleic acid–deoxyribonucleic acid hybridization in microdilution wells as an alternative to membrane filter hybridization in which radioisotopes are used to determine genetic relatedness among bacterial strains. Int J Syst Bacteriol 39:224–229 [CrossRef]
   [Google Scholar]
8. Fritze D. 1996; Bacillus haloalkaliphilus sp. nov. Int J Syst Bacteriol 46:98–101 [CrossRef]
   [Google Scholar]
9. Gibson D. T., Subramanian V. 1984; Microbial degradation of aromatic hydrocarbons. In Microbial Degradation of Organic Compounds pp 181–252Edited by Gibson D. T. New York: Marcel Dekker;
   [Google Scholar]
10. Horikoshi K. 1991 Microorganisms in Alkaline Environments Weinheim: VCH;
    [Google Scholar]
11. Hugh R., Leifson E. 1953; The taxonomic significance of fermentative versus oxidative metabolism of carbohydrates by various Gram-negative bacteria. J Bacteriol 66:24–26
    [Google Scholar]
12. Kimura M. 1980; A simple method for estimating evolutionary rates of base substitutions through comparative studies of nucleotide sequences. J Mol Evol 16:111–120 [CrossRef]
    [Google Scholar]
13. Krulwich T. A., Guffanti A. A. 1989; Alkalophilic bacteria. Annu Rev Microbiol 43:435–463 [CrossRef]
    [Google Scholar]
14. Marmur J. 1961; A procedure for the isolation of deoxyribonucleic acid from micro-organisms. J Mol Biol 3:208–218 [CrossRef]
    [Google Scholar]
15. Mason J. R., Cammack R. 1992; The electron-transport proteins of hydroxylating bacterial dioxygenases. Annu Rev Microbiol 46:277–305 [CrossRef]
    [Google Scholar]
16. Nielsen P., Rainey F. A., Outtrup H., Priest F. G., Fritze D. 1994; Comparative 16S rDNA sequence analysis of some alkaliphilic bacilli and the establishment of a sixth rRNA group within the genus Bacillus . FEMS Microbiol Lett 117:61–66 [CrossRef]
    [Google Scholar]
17. Nielsen P., Fritze D., Priest F. G. 1995; Phenetic diversity of alkaliphilic Bacillus strains: proposal for nine new species. Microbiology 141:1745–1761 [CrossRef]
    [Google Scholar]
18. Saitou N., Nei M. 1987; The neighbor-joining method: a new method for reconstructing phylogenetic trees. Mol Biol Evol 4:406–425
    [Google Scholar]
19. Spanka R., Fritze D. 1993; Bacillus cohnii sp. nov., a new obligately alkaliphilic, oval-spore-forming Bacillus species with ornithine and aspartic acid instead of diaminopimelic acid in the cell wall. Int J Syst Bacteriol 40:92–97
    [Google Scholar]
20. Switzer Blum J., Burns Bindi A., Buzzelli J., Stolz J. F., Oremland R. S. 1998; Bacillus arsenicoselenatis sp. nov. and Bacillus selenitireducence sp. nov. Two haloalkaliphiles from Mono Lake, California that respire oxyanions of selenium and arsenic. Arch Microbiol 171:19–30 [CrossRef]
    [Google Scholar]
21. Takami H., Horikoshi K. 1999; Reidentification of facultatively alkaliphilic Bacillus sp. C-125 to Bacillus halodurans . Biosci Biotechnol Biochem 63:943–945 [CrossRef]
    [Google Scholar]
22. Tamaoka J., Komagata K. 1984; Determination of DNA base composition by reversed-phase high-performance liquid chromatography. FEMS Microbiol Lett 25:125–128 [CrossRef]
    [Google Scholar]
23. Thompson J. D., Higgins D. G., Gibson T. J. 1994; clustal w: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice. Nucleic Acids Res 22:4673–4680 [CrossRef]
    [Google Scholar]
24. Vedder A. 1934; Bacillus alcalophilus n. sp.; benevens enkele ervaringen met sterk alcalische voedingbodems. Antonie Leeuwenhoek J Microbiol Serol 1:143–147
    [Google Scholar]
25. Yumoto I., Yamazaki K., Sawabe T., Nakano K., Kawasaki K., Ezura Y., Shinano H. 1998; Bacillus horti sp. nov., a new Gram-negative alkaliphilic bacillus. Int J Syst Bacteriol 48:565–571 [CrossRef]
    [Google Scholar]
26. Yumoto I., Yamazaki K., Hishinuma M., Nodasaka Y., Inoue N., Kawasaki K. 2000; Identification of facultatively alkaliphilic Bacillus sp. strain YN-2000 and its fatty acid composition and cell-surface aspects depending on culture pH. Extremophiles 4:285–290 [CrossRef]
    [Google Scholar]
27. Yumoto I., Yamazaki K., Hishinuma M., Nodasaka Y., Suemori A., Nakajima K., Inoue N., Kawasaki K. 2001; Pseudomonas alcaliphila sp. nov., a novel facultatively psychrophilic alkaliphile isolated from seawater. Int J Syst Evol Microbiol 51:349–355
    [Google Scholar]
28. Yumoto I., Nakamura A., Iwata H., Kojima K., Kusumoto K., Nodasaka Y., Matsuyama H. 2002; Dietzia psychraliphila sp. nov., a novel, facultatively psychrophilic alkaliphile that grows on hydrocarbons. Int J Syst Evol Microbiol 52:85–90
    [Google Scholar]