Flavobacterium dongtanense sp. nov., isolated from the rhizosphere of a wetland reed

References

1. Bergey D. H., Harrison F. C., Breed R. S., Hammer B. W., Huntoon F. M. (editors) 1923 Bergey's Manual of Determinative Bacteriology Baltimore: Williams & Wilkins;
   [Google Scholar]
2. Bernardet J.-F., Bowman J. P. 2006; The genus Flavobacterium . In The Prokaryotes, 3rd edn. vol 7 pp 481–531 Edited by Dworkin M., Falkow S., Rosenberg E., Schleifer K. H., Stackebrandt E. Berlin: Springer;
   [Google Scholar]
3. Bernardet J.-F., Segers P., Vancanneyt M., Berthe F., Kersters K., Vandamme P. 1996; Cutting a Gordian knot: emended classification and description of the genus Flavobacterium , emended description of the family Flavobacteriaceae , and proposal of Flavobacterium hydatis nom. nov. (basonym, Cytophaga aquatilis Strohl and Tait 1978). Int J Syst Bacteriol 46:128–148 [CrossRef]
   [Google Scholar]
4. Bernardet J.-F., Nakagawa Y., Holmes B. 2002; Proposed minimal standards for describing new taxa of the family Flavobacteriaceae and emended description of the family. Int J Syst Evol Microbiol 52:1049–1070 [CrossRef]
   [Google Scholar]
5. Chun J., Lee J. H., Jung Y. Y., Kim M. J., Kim S., Kim B. K., Lim Y. W. 2007; EzTaxon: a web-based tool for the identification of prokaryotes based on 16S ribosomal RNA gene sequences. Int J Syst Evol Microbiol 57:2259–2261 [CrossRef]
   [Google Scholar]
6. Dong X.-Z., Cai M.-Y. 2001 Determinative Manual for Routine Bacteriology Beijing: Scientific Press;
   [Google Scholar]
7. Fautz E., Reichenbach H. 1980; A simple test for flexirubin-type pigments. FEMS Microbiol Lett 8:87–91 [CrossRef]
   [Google Scholar]
8. Felsenstein J. 1985; Confidence limits on phylogenies: an approach using the bootstrap. Evolution 39:783–791 [CrossRef]
   [Google Scholar]
9. Gerhardt P., Murray R. G. E., Wood W. A., Krieg N. R. 1994 Methods for General and Molecular Bacteriology Washington, DC: American Society for Microbiology;
   [Google Scholar]
10. Gonzalez J. M., Saiz-Jimenez C. 2002; A fluorimetric method for the estimation of G+C mol% content in microorganisms by thermal denaturation temperature. Environ Microbiol 4:770–773 [CrossRef]
    [Google Scholar]
11. Jukes T. H., Cantor C. R. 1969; Evolution of protein molecules. In Mammalian Protein Metabolism vol 3 pp 21–132 Edited by Munro H. N. New York: Academic Press;
    [Google Scholar]
12. Komagata K., Suzuki K. 1987; Lipid and cell-wall analysis in bacterial systematics. Methods Microbiol 19:161–207
    [Google Scholar]
13. Qu J.-H., Li H.-F., Yang J.-S., Yuan H.-L. 2008; Flavobacterium cheniae sp. nov., isolated from sediment of a eutrophic reservoir. Int J Syst Evol Microbiol 58:2186–2190 [CrossRef]
    [Google Scholar]
14. Quan Z. X., Bae H. S., Baek J. H., Chen W. F., Im W. T., Lee S. T. 2005; Rhizobium daejeonense sp. nov. isolated from a cyanide treatment bioreactor. Int J Syst Evol Microbiol 55:2543–2549 [CrossRef]
    [Google Scholar]
15. Saha P., Chakrabarti T. 2006; Flavobacterium indicum sp. nov., isolated from warm spring water in Assam, India. Int J Syst Evol Microbiol 56:2617–2621 [CrossRef]
    [Google Scholar]
16. Saitou N., Nei M. 1987; The neighbor-joining method: a new method for reconstructing phylogenetic trees. Mol Biol Evol 4:406–425
    [Google Scholar]
17. Sasser M. 1990 Identification of bacteria by gas chromatography of cellular fatty acids , MIDI Technical Note 101 Newark, DE: MIDI Inc;
    [Google Scholar]
18. Swofford D. L. 1993 paup: phylogenetic analysis using parsimony, version 3.1.1 Champaign, IL: Illinois Natural History Survey;
    [Google Scholar]
19. Tamura K., Dudley J., Nei M., Kumar S. 2007; mega4: molecular evolutionary genetics analysis (mega) software version 4.0. Mol Biol Evol 24:1596–1599 [CrossRef]
    [Google Scholar]
20. Thompson J. D., Gibson T. J., Plewniak F., Jeanmougin F., Higgins D. G. 1997; The clustal_x windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools. Nucleic Acids Res 25:4876–4882 [CrossRef]
    [Google Scholar]
21. Weon H.-Y., Song M.-H., Son J.-A., Kim B.-Y., Kwon S. W., Go S.-J., Stackebrandt E. 2007; Flavobacterium terrae sp. nov. and Flavobacterium cucumis sp. nov., isolated from greenhouse soil. Int J Syst Evol Microbiol 57:1594–1598 [CrossRef]
    [Google Scholar]
22. Xu H.-X., Kawamura Y., Li N., Zhao L., Li T.-M., Li Z.-Y., Shu S., Ezaki T. 2000; A rapid method for determining the G+C content of bacterial chromosomes by monitoring fluorescence intensity during DNA denaturation in a capillary tube. Int J Syst Evol Microbiol 50:1463–1469 [CrossRef]
    [Google Scholar]
23. Yoon H. S., Aslam Z., Song G. C., Kim S. W., Jeon C. O., Chon T. S., Chung Y. R. 2009; Flavobacterium sasangense sp. nov., isolated from a wastewater stream polluted with heavy metals. Int J Syst Evol Microbiol 59:1162–1166 [Retraction: Int J Syst Evol Microbiol (2010), 60, 267–268]
    [Google Scholar]