1887

Abstract

A novel aerobic, chemoheterotrophic, bacteriochlorophyll-containing bacterium, strain OCh 323, was isolated from sand at Monkey Mia, Shark Bay, located on the west coast of Australia. The cells were Gram-negative, non-motile rods of variable length; one or both cell poles was narrower. Bacteriochlorophyll was synthesized under aerobic conditions. Catalase, oxidase and urease were produced. The ONPG reaction was positive. The major component of the cellular fatty acid was octadecenoic acid (18 : 1). The DNA G+C content was 68·1 mol%. The results of 16S rRNA gene sequence comparisons revealed that strain OCh 323 formed a novel, separate line of descent within the -3 group of the . The similarity value for the 16S rRNA gene sequence of strain OCh 323 and that of the most closely related species, , was 91·4 %. It is concluded that strain OCh 323 (=JCM 11220=CIP 107377) should be placed in a novel genus, gen. nov., as the type strain of a novel species sp. nov.

Loading

Article metrics loading...

/content/journal/ijsem/10.1099/ijs.0.02094-0
2006-02-01
2024-12-12
Loading full text...

Full text loading...

/deliver/fulltext/ijsem/56/2/417.html?itemId=/content/journal/ijsem/10.1099/ijs.0.02094-0&mimeType=html&fmt=ahah

References

  1. Felsenstein J. 1995 phylip (phylogeny inference package), version 3.57c. Distributed by the author. Department of Genome Sciences University of Washington; Seattle, USA:
    [Google Scholar]
  2. Fuerst J. A., Hawkins J. A., Holmes A., Sly L. I., Moore C. J., Stackebrandt E. 1993; Porphyrobacter neustonensis gen. nov., sp. nov., an aerobic bacteriochlorophyll-synthesizing budding bacterium from fresh water. Int J Syst Bacteriol 43:125–134 [CrossRef]
    [Google Scholar]
  3. Hiraishi A., Matsuzawa Y., Kanbe T., Wakao N. 2000; Acidisphaera rubrifaciens gen. nov., sp. nov., an aerobic bacteriochlorophyll-containing bacterium isolated from acidic environments. Int J Syst Evol Microbiol 50:1539–1546 [CrossRef]
    [Google Scholar]
  4. Hirsch P. 1974; Budding bacteria. Annu Rev Microbiol 28:391–444 [CrossRef]
    [Google Scholar]
  5. Katayama-Fujimura Y., Komatsu Y., Kuraishi H., Kaneko T. 1984; Estimation of DNA base composition by high performance liquid chromatography of its nuclease P1 hydrolysate. Agric Biol Chem 48:3169–3172 [CrossRef]
    [Google Scholar]
  6. Labrenz M., Collins M. D., Lawson P. A., Tindall B. J., Schumann P., Hirsch P. 1999; Roseovarius tolerans gen. nov., sp. nov. a budding bacterium with variable bacteriochlorophyll a production from hypersaline Ekho Lake. Int J Syst Bacteriol 49:137–147 [CrossRef]
    [Google Scholar]
  7. Labrenz M., Tindall B. J., Lawson P. A., Collins M. D., Schumann P., Hirsch P. 2000; Staleya guttiformis gen. nov., sp. nov. and Sulfitobacter brevis sp. nov., α -3- Proteobacteria from hypersaline, heliothermal and meromictic antarctic Ekho Lake. Int J Syst Evol Microbiol 50:303–313 [CrossRef]
    [Google Scholar]
  8. Lemos M. L., Toranzo A. E., Barja J. L. 1985; Modified medium for the oxidation-fermentation test in the identification of marine bacteria. Appl Environ Microbiol 49:1541–1543
    [Google Scholar]
  9. Nishimura Y., Muroga Y., Saito S., Shiba T., Takamiya K., Shioi Y. 1994; DNA relatedness and chemotaxonomic feature of aerobic bacteriochlorophyll-containing bacteria isolated from coasts of Australia. J Gen Appl Microbiol 40:287–296 [CrossRef]
    [Google Scholar]
  10. Saitoh S., Suzuki T., Nishimura Y. 1998; Proposal of Craurococcus roseus gen.nov., sp. nov. and Paracraurococcus ruber gen. nov., sp. nov.,novel aerobic bacteriochlorophyll a -containing bacteria from soil. Int J Syst Bacteriol 48:1043–1047 [CrossRef]
    [Google Scholar]
  11. Sambrook J., Fritsch E. F., Maniatis T. 1989 Molecular Cloning: a Laboratory Manual , 2nd edn. Cold Spring Harbor, NY: Cold Spring Harbor Laboratory;
    [Google Scholar]
  12. Sato K. 1978; Bacteriochlorophyll formation by facultative methylotrophs, Protaminobacter ruber and Pseudomonas AM 1. FEBS Lett 85:207–210 [CrossRef]
    [Google Scholar]
  13. Shiba T., Simidu U. 1982; Erythrobacter longus gen nov., sp. nov. an aerobic bacterium which contains bacteriochlorophyll a . Int J Syst Bacteriol 32211–217 [CrossRef]
    [Google Scholar]
  14. Shiba T., Shioi Y., Takamiya K., Sutton D. C., Wilkinson C. R. 1991; Distribution and physiology of aerobic bacteria containing bacteriochlorophyll a on the east and west coasts of Australia. Appl Environ Microbiol 57:295–300
    [Google Scholar]
  15. Sorokin D. Y., Tourova T. P., Kuznetsov B. B., Bryantseva I. A., Gorlenko V. M. 2000; Roseinatronobacter thiooxidans gen. nov., sp. nov. a new alkaliphilic aerobic bacteriochlorophyll a -containing bacterium isolated from a soda lake. Microbiology (English translation of Mikrobiologiia) 69:75–82 [CrossRef]
    [Google Scholar]
  16. Suyama T., Shigematsu T., Takaichi S., Nodasaka Y., Fujikawa S., Hosoya H., Tokiwa Y., Kanagawa T., Hanada S. 1999; Roseateles depolymerans gen. nov., sp. nov. a new bacteriochlorophyll a -containing obligate aerobe belonging to the β -subclass of the Proteobacteria . Int J Syst Bacteriol 49:449–457 [CrossRef]
    [Google Scholar]
  17. Suzuki T., Yamasato K. 1994; Phylogeny of spore-forming lactic acid bacteria based on 16S rRNA gene sequences. FEMS Microbiol Lett 115:13–18 [CrossRef]
    [Google Scholar]
  18. Suzuki T., Muroga Y., Takahama M., Shiba T., Nishimura Y. 1999a; Rubrimonas cliftonensis gen. nov., sp. nov. an aerobic bacteriochlorophyll-containing bacterium isolated from a saline lake. Int J Syst Bacteriol 49:201–205 [CrossRef]
    [Google Scholar]
  19. Suzuki T., Muroga Y., Takahama M., Nishimura Y. 1999b; Roseivivax halodurans gen. nov., sp. nov. and Roseivivax halotolerans sp. nov. aerobic bacteriochlorophyll-containing bacteria isolated from a saline lake. Int J Syst Bacteriol 49:629–634 [CrossRef]
    [Google Scholar]
  20. Suzuki T., Muroga Y., Takahama M., Nishimura Y. 2000; Roseibium denhamense gen. nov., sp. nov. and Roseibium hamelinense sp. nov. aerobic bacteriochlorophyll-containing bacteria isolated from the east and west coasts of Australia. Int J Syst Evol Microbiol 50:2151–2156 [CrossRef]
    [Google Scholar]
  21. Taga N. 1968; Some ecological aspects of marine bacteria in the Kuroshio current. Bull Misaki Mar Biol Inst Kyoto Univ 12:56–76
    [Google Scholar]
  22. Thompson J. D., Gibson T. J., Plewniak F., Jeanmougin F., Higgins D. G. 1997; The clustal_x Windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools. Nucleic Acids Res 25:4876–4882 [CrossRef]
    [Google Scholar]
  23. Yurkov V. V., Beatty J. T. 1998; Aerobic anoxygenic phototrophic bacteria. Microbiol Mol Biol Rev 62:695–724
    [Google Scholar]
  24. Yurkov V. V., Krieger S., Stackebrandt E., Beatty J. T. 1999; Citromicrobium bathyomarinum , a novel aerobic bacterium isolated from deep-sea hydrothermal vent plume waters that contains photosynthetic pigment-protein complexes. J Bacteriol 181:4517–4525
    [Google Scholar]
/content/journal/ijsem/10.1099/ijs.0.02094-0
Loading
/content/journal/ijsem/10.1099/ijs.0.02094-0
Loading

Data & Media loading...

This is a required field
Please enter a valid email address
Approval was a Success
Invalid data
An Error Occurred
Approval was partially successful, following selected items could not be processed due to error