Ottowia pentelensis sp. nov., a floc-forming betaproteobacterium isolated from an activated sludge system treating coke plant effluent

References

1. Cashion P., Holder-Franklin M. A., McCully J., Franklin M. 1977; A rapid method for the base ratio determination of bacterial DNA. Anal Biochem 81:461–466 [View Article][PubMed]
   [Google Scholar]
2. Chun J., Lee J. H., Jung Y., Kim M., Kim S., Kim B. K., Lim Y. W. 2007; EzTaxon: a web-based tool for the identification of prokaryotes based on 16S ribosomal RNA gene sequences. Int J Syst Evol Microbiol 57:2259–2261 [View Article][PubMed]
   [Google Scholar]
3. Claus M. 1992; A standardised Gram staining procedure. World J Microbiol Biotechnol 8:451–452 [View Article]
   [Google Scholar]
4. Collins M. D., Pirouz T., Goodfellow M., Minnikin D. E. 1977; Distribution of menaquinones in actinomycetes and corynebacteria. J Gen Microbiol 100:221–230[PubMed] [CrossRef]
   [Google Scholar]
5. Cowan S. T., Steel K. J. 1974 Manual for the Identification of Medical Bacteria, 2nd edn. Cambridge: Cambridge University Press;
   [Google Scholar]
6. Felföldi T., Székely A. J., Gorál R., Barkács K., Scheirich G., András J., Rácz A., Márialigeti K. 2010; Polyphasic bacterial community analysis of an aerobic activated sludge removing phenols and thiocyanate from coke plant effluent. Bioresour Technol 101:3406–3414 [View Article][PubMed]
   [Google Scholar]
7. Groth I., Schumann P., Rainey F. A., Martin K., Schuetze B., Augsten K. 1997; Demetria terragena gen. nov., sp. nov., a new genus of actinomycetes isolated from compost soil. Int J Syst Bacteriol 47:1129–1133 [View Article][PubMed]
   [Google Scholar]
8. Hasegawa T., Takizawa M., Tanida S. 1983; A rapid analysis for chemical grouping of aerobic actinomycetes. J Gen Appl Microbiol 29:319–322 [View Article]
   [Google Scholar]
9. Heimbrook M. E., Wang W. L. L., Campbell G. 1989; Staining bacterial flagella easily. J Clin Microbiol 27:2612–2615[PubMed]
   [Google Scholar]
10. Katayama Y., Narahara Y., Inoue Y., Amano F., Kanagawa T., Kuraishi H. 1992; A thiocyanate hydrolase of Thiobacillus thioparus. A novel enzyme catalyzing the formation of carbonyl sulfide from thiocyanate. J Biol Chem 267:9170–9175[PubMed]
    [Google Scholar]
11. Kämpfer P., Steiof M., Dott W. 1991; Microbiological characterization of a fuel-oil contaminated site including numerical identification of heterotrophic water and soil bacteria. Microb Ecol 21:227–251 [View Article]
    [Google Scholar]
12. Kämpfer P., Kroppenstedt R. M. 1996; Numerical analysis of fatty acid patterns of coryneform bacteria and related taxa. Can J Microbiol 42:989–1005 [View Article]
    [Google Scholar]
13. Malik K. A., Schlegel H. G. 1981; Chemolithoautotrophic growth of bacteria able to grow under N₂-fixing conditions. FEMS Microbiol Lett 11:63–67 [View Article]
    [Google Scholar]
14. Mesbah M., Premachandran U., Whitman W. B. 1989; Precise measurement of the G+C content of deoxyribonucleic acid by high-performance liquid chromatography. Int J Syst Bacteriol 39:159–167 [View Article]
    [Google Scholar]
15. Ostle A. G., Holt J. G. 1982; Nile blue A as a fluorescent stain for poly-β-hydroxybutyrate. Appl Environ Microbiol 44:238–241[PubMed]
    [Google Scholar]
16. Sipos R., Székely A. J., Palatinszky M., Révész S., Márialigeti K., Nikolausz M. 2007; Effect of primer mismatch, annealing temperature and PCR cycle number on 16S rRNA gene-targetting bacterial community analysis. FEMS Microbiol Ecol 60:341–350 [View Article][PubMed]
    [Google Scholar]
17. Smibert R. M., Krieg N. R. 1994; Phenotypic characterization. In Methods for General and Molecular Bacteriology pp. 607–654 Edited by Gerhardt P., Murray R. G. E., Wood W. A., Krieg N. R. Washington, DC: American Society for Microbiology;
    [Google Scholar]
18. Spring S., Jäckel U., Wagner M., Kämpfer P. 2004; Ottowia thiooxydans gen. nov., sp. nov., a novel facultatively anaerobic, N₂O-producing bacterium isolated from activated sludge, and transfer of Aquaspirillum gracile to Hylemonella gracilis gen. nov., comb. nov. Int J Syst Evol Microbiol 54:99–106 [View Article][PubMed]
    [Google Scholar]
19. Stead D. E., Sellwood J. E., Wilson J., Viney I. 1992; Evaluation of a commercial microbial identification system based on fatty acid profiles for rapid, accurate identification of plant pathogenic bacteria. J Appl Microbiol 72:315–321 [View Article]
    [Google Scholar]
20. Tamaoka J., Komagata K. 1984; Determination of DNA base composition by reversed-phase high-performance liquid chromatography. FEMS Microbiol Lett 25:125–128 [View Article]
    [Google Scholar]
21. Tamura K., Dudley J., Nei M., Kumar S. 2007; mega4: molecular evolutionary genetics analysis (mega) software version 4.0. Mol Biol Evol 24:1596–1599 [View Article][PubMed]
    [Google Scholar]
22. Tarrand J. J., Gröschel D. H. M. 1982; Rapid, modified oxidase test for oxidase-variable bacterial isolates. J Clin Microbiol 16:772–774[PubMed]
    [Google Scholar]
23. Tindall B. J. 1990a; A comparative study of the lipid composition of Halobacterium saccharovorum from various sources. Syst Appl Microbiol 13:128–130 [CrossRef]
    [Google Scholar]
24. Tindall B. J. 1990b; Lipid composition of Halobacterium lacusprofundi . FEMS Microbiol Lett 66:199–202 [View Article]
    [Google Scholar]
25. Wen A., Fegan M., Hayward C., Chakraborty S., Sly L. I. 1999; Phylogenetic relationships among members of the Comamonadaceae, and description of Delftia acidovorans (den Dooren de Jong 1926 and Tamaoka et al. 1987) gen. nov., comb. nov.. Int J Syst Bacteriol 49:567–576 [View Article][PubMed]
    [Google Scholar]
26. Yamada K., Komagata K. 1972; Taxonomic studies on coryneform bacteria. IV. Morphological, cultural, biochemical and physiological characteristics. J Gen Appl Microbiol 18:399–416 [View Article]
    [Google Scholar]