Flavobacterium beibuense sp. nov., isolated from marine sediment

References

1. Ausubel F. M., Brent R., Kingston R. E., Moore D. D., Seidman J. G., Smith J. A., Struhl K. (editors) 1995 Short Protocols in Molecular Biology: a Compendium of Methods from Current Protocols in Molecular Biology, 3rd edn. New York: Wiley;
   [Google Scholar]
2. Bergey D. H., Harrison F. C., Breed R. S., Hammer B. W., Huntoon F. M. (editors) 1923 Bergey's Manual of Determinative Bacteriology Baltimore: Williams & Wilkins;
   [Google Scholar]
3. Bernardet J.-F., Bowman J. 2006; The genus Flavobacterium . In The Prokaryotes: a Handbook on the Biology of Bacteria. , 3rd edn. vol 7 pp 481–531 Edited by Dworkin M., Falkow S., Rosenberg E., Schleifer K. H., Stackebrandt E. New York: Springer;
4. Bernardet J.-F., Nakagawa Y. 2006; An introduction to the family Flavobacteriaceae . In The Prokaryotes: a Handbook on the Biology of Bacteria 3rd edn, vol. 7 pp 455–480 Edited by Dworkin M., Falkow S., Rosenberg E., Schleifer K. H., Stackebrandt E. New York: Springer;
   [Google Scholar]
5. Bernardet J.-F., Segers P., Vancanneyt M., Berthe F., Kersters K., Vandamme P. 1996; Cutting a Gordian knot: emended classification and description of the genus Flavobacterium , emended description of the family Flavobacteriaceae , and proposal of Flavobacterium hydatis nom. nov. (basonym Cytophaga aquatilis Strohl and Tait 1978). Int J Syst Bacteriol 46:128–148 [CrossRef]
   [Google Scholar]
6. Bernardet J.-F., Nakagawa Y., Holmes B. 2002; Proposed minimal standards for describing new taxa of the family Flavobacteriaceae and emended description of the family. Int J Syst Evol Microbiol 52:1049–1070 [CrossRef]
   [Google Scholar]
7. Dong X.-Z., Cai M.-Y. 2001; Determinative Manual for Routine Bacteriology. Beijing: : Scientific Press (English translation)
8. Kimura M. 1980; A simple model for estimating evolutionary rates of base substitutions through comparative studies of nucleotide sequences. J Mol Evol 16:111–120 [CrossRef]
   [Google Scholar]
9. Lai Q., Yuan J., Gu L., Shao Z. 2009; Marispirillum indicum gen. nov., sp. nov. isolated from a deep-sea environment. Int J Syst Evol Microbiol 59:1278–1281 [CrossRef]
   [Google Scholar]
10. Liu C., Shao Z. 2005; Alcanivorax dieselolei sp. nov., a novel alkane-degrading bacterium isolated from sea water and deep-sea sediment. Int J Syst Evol Microbiol 55:1181–1186 [CrossRef]
    [Google Scholar]
11. Liu H., Liu R., Yang S.-Y., Gao W.-K., Zhang C.-X., Zhang K.-Y., Lai R. 2008; Flavobacterium anhuiense sp. nov., isolated from field soil. Int J Syst Evol Microbiol 58:756–760 [CrossRef]
    [Google Scholar]
12. Mandri T., Lin J. 2007; Isolation and characterization of engine oil degrading indigenous microrganisms in Kwazulu-Natal, South Africa. Afr J Biotechnol 6:23–27
    [Google Scholar]
13. Mesbah M., Whitman W. B. 1989; Measurement of deoxyguanosine/thymidine ratios in complex mixtures by high-performance liquid chromatography for determination of the mole percentage guanine+cytosine of DNA. J Chromatogr 479:297–306 [CrossRef]
    [Google Scholar]
14. Rzhetsky A., Nei M. 1992; A simple method for estimating and testing minimum evolution trees. Mol Biol Evol 9:945–967
    [Google Scholar]
15. Rzhetsky A., Nei M. 1993; Theoretical foundation of the minimum-evolution method of phylogenetic inference. Mol Biol Evol 10:1073–1095
    [Google Scholar]
16. Saitou N., Nei M. 1987; The neighbor-joining method: a new method for reconstructing phylogenetic trees. Mol Biol Evol 4:406–425
    [Google Scholar]
17. Sasser M. 1990; Identification of bacteria by gas chromatography of cellular fatty acids . Technical Note 101: Newark, DE: MIDI;
    [Google Scholar]
18. Shieh W. Y., Chen Y.-W., Chaw S.-M., Chiu H.-H. 2003; Vibrio ruber sp. nov., a red, facultatively anaerobic, marine bacterium isolated from sea water. Int J Syst Evol Microbiol 53:479–484 [CrossRef]
    [Google Scholar]
19. Stackebrandt E., Goebel B. M. 1994; Taxonomic note: a place for DNA-DNA reassociation and 16S rRNA sequence analysis in the present species definition in bacteriology. Int J Syst Bacteriol 44:846–849 [CrossRef]
    [Google Scholar]
20. Tamura K., Dudley J., Nei M., Kumar S. 2007; mega4: molecular evolutionary genetics analysis (mega) software version 4.0. Mol Biol Evol 24:1596–1599 [CrossRef]
    [Google Scholar]
21. Van Trappen S., Mergaert J., Swings J. 2003; Flavobacterium gelidilacus sp. nov., isolated from microbial mats in Antarctic lakes. Int J Syst Evol Microbiol 53:1241–1245 [CrossRef]
    [Google Scholar]
22. Van Trappen S., Vandecandelaere I., Mergaert J., Swings J. 2004; Flavobacterium degerlachei sp. nov., Flavobacterium frigoris sp.nov. and Flavobacterium micromati sp. nov., novel psychrophilic bacteria isolated from microbial mats in Antarctic lakes. Int J Syst Evol Microbiol 54:85–92 [CrossRef]
    [Google Scholar]
23. Vela A. I., Fernandez A., Sánchez-Porro C., Sierra E., Mendez M., Arbelo M., Ventosa A., Domínguez L., Fernández-Garayzábal J. F. 2007; Flavobacterium ceti sp. nov., isolated from beaked whales ( Ziphius cavirostris ). Int J Syst Evol Microbiol 57:2604–2608 [CrossRef]
    [Google Scholar]
24. Weon H.-Y., Song M.-H., Son J.-A., Kim B.-Y., Kwon S.-W., Go S.-J., Stackebrandt E. 2007; Flavobacterium terrae sp. nov. and Flavobacterium cucumis sp. nov., isolated from greenhouse soil. Int J Syst Evol Microbiol 57:1594–1598 [CrossRef]
    [Google Scholar]