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Volume 60, Issue 8

sp. nov., isolated from a tidal flat Free

Abstract

A Gram-staining-negative, moderately halophilic bacterium, designated strain AN9, was isolated from a tidal flat of the Taean coast in South Korea. Cells were catalase- and oxidase-positive short rods that were motile by means of a single polar flagellum. Growth of strain AN9 was observed at 15–40 °C (optimum, 25–30 °C) and at pH 6.0–8.0 (optimum, pH 6.5–7.5). Strain AN9 contained ubiquinone Q-8 as the predominant isoprenoid quinone and C 3-OH (31.7 %), C 7 (24.8 %), C (14.7 %) and summed feature 3 (comprising C 7 and/or iso-C 2-OH, 10.72 %) as the major fatty acids. The G+C content of the genomic DNA of strain AN9 was 58 mol%. Phylogenetic analysis based on 16S rRNA gene sequences showed that strain AN9 was related to members of the genus and was related most closely to IMCC1877 (96.8 % similarity). On the basis of chemotaxonomic and molecular data, strain AN9 is considered to represent a novel species of the genus , for which the name sp. nov. is proposed. The type strain is AN9 (=KACC 13703 =DSM 22012).

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2010-08-01
2024-04-18
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References

  1. Baik K. S., Seong C. N., Kim E. M., Yi H., Bae K. S., Chun J. 2005; Hahella ganghwensis sp. nov., isolated from tidal flat sediment. Int J Syst Evol Microbiol 55:681–684 [CrossRef]
     [Google Scholar]
  2. Chang H. W., Nam Y. D., Kwon H. Y., Park J. R., Lee J. S., Yoon J. H., An K. G., Bae J. W. 2007; Marinobacterium halophilum sp. nov., a marine bacterium isolated from the Yellow Sea. Int J Syst Evol Microbiol 57:77–80 [CrossRef]
     [Google Scholar]
  3. Chun J., Lee J. H., Jung Y., Kim M., Kim S., Kim B. K., Lim Y. W. 2007; EzTaxon: a web-based tool for the identification of prokaryotes based on 16S ribosomal RNA gene sequences. Int J Syst Evol Microbiol 57:2259–2261 [CrossRef]
     [Google Scholar]
  4. Felsenstein J. 2002 phylip (phylogeny inference package), version 3.6a. Distributed by the author. Department of Genome Sciences University of Washington; Seattle, USA:
     [Google Scholar]
  5. González J. M., Mayer F., Moran M. A., Hodson R. E., Whitman W. B. 1997; Microbulbifer hydrolyticus gen. nov., sp. nov., and Marinobacterium georgiense gen. nov., sp. nov., two marine bacteria from a lignin-rich pulp mill waste enrichment community. Int J Syst Bacteriol 47:369–376 [CrossRef]
     [Google Scholar]
  6. Huo Y. Y., Xu X. W., Cao Y., Wang C. S., Zhu X. F., Oren A., Wu M. 2009 Marinobacterium nitratireducens sp. nov. and Marinobacterium sediminicola sp. nov., isolated from marine sediment. Int J Syst Evol Microbiol 59, 1173–1178 [CrossRef]
  7. Jeon C. O., Park W., Ghiorse W. C., Madsen E. L. 2004; Polaromonas naphthalenivorans sp. nov., a naphthalene-degrading bacterium from naphthalene-contaminated sediment. Int J Syst Evol Microbiol 54:93–97 [CrossRef]
     [Google Scholar]
  8. Kahng H. Y., Chung B. S., Lee D. H., Jung J. S., Park J. H., Jeon C. O. 2009; Cellulophaga tyrosinoxydans sp. nov., a tyrosinase-producing bacterium isolated from seawater. Int J Syst Evol Microbiol 59:654–657 [CrossRef]
     [Google Scholar]
  9. Kim H., Choo Y. J., Song J., Lee J. S., Lee K. C., Cho J. C. 2007; Marinobacterium litorale sp. nov., in the order Oceanospirillales . Int J Syst Evol Microbiol 57:1659–1662 [CrossRef]
     [Google Scholar]
  10. Kim Y. G., Jin Y. A., Hwang C. Y., Cho B. C. 2008a; Marinobacterium rhizophilum sp. nov., isolated from the rhizosphere of the coastal tidal-flat plant Suaeda japonica . Int J Syst Evol Microbiol 58:164–167 [CrossRef]
     [Google Scholar]
  11. Kim J. M., Le N. T., Chung B. S., Park J. H., Bae J.-W., Madsen E. L., Jeon C. O. 2008b; Influence of soil components on the biodegradation of benzene, toluene, ethylbenzene, and o-, m-, and p-xylenes by the newly isolated bacterium Pseudoxanthomonas spadix BD-a59. Appl Environ Microbiol 74:7313–7320 [CrossRef]
     [Google Scholar]
  12. Kim S.-J., Park S.-J., Yoon D.-N., Park B.-J., Choi B.-R., Lee D.-H., Roh Y., Rhee S.-K. 2009a; Marinobacterium maritimum sp. nov., a marine bacterium isolated from Arctic sediment. Int J Syst Evol Microbiol 59:3030–3034 [CrossRef]
     [Google Scholar]
  13. Kim H., Oh H. M., Yang S. J., Lee J. S., Hong J. S., Cho J. C. 2009b; Marinobacterium marisflavi sp. nov., isolated from a costal seawater. Curr Microbiol 58:511–515 [CrossRef]
     [Google Scholar]
  14. Komagata K., Suzuki K. 1987; Lipid and cell-wall analysis in bacterial systematics. Methods Microbiol 19:161–207
     [Google Scholar]
  15. Lányí B. 1987; Classical and rapid identification methods for medically important bacteria. Methods Microbiol 19:1–67
     [Google Scholar]
  16. Leifson E. 1963; Determination of carbohydrate metabolism of marine bacteria. J Bacteriol 85:1183–1184
     [Google Scholar]
  17. Lu S., Park M., Ro H.-S., Lee D. S., Park W., Jeon C. O. 2006; Analysis of microbial communities using culture-dependent and culture-independent approaches in an anaerobic/aerobic SBR reactor. J Microbiol 44:155–161
     [Google Scholar]
  18. Smibert R. M., Krieg N. R. 1994; Phenotypic characterization. In Methods for General and Molecular Bacteriology . pp 607–654 Edited by Gerhardt P. Washington, DC: American Society for Microbiology;
  19. Tamaoka J., Komagata K. 1984; Determination of DNA base composition by reversed-phase high-performance liquid chromatography. FEMS Microbiol Lett 25:125–128 [CrossRef]
     [Google Scholar]
  20. Thompson J. D., Higgins D. G., Gibson T. J. 1994; clustal w: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice. Nucleic Acids Res 22:4673–4680 [CrossRef]
     [Google Scholar]
  21. Yi H., Chun J. 2004a; Hongiella mannitolivorans gen. nov., sp. nov., Hongiella halophila sp. nov. and Hongiella ornithinivorans sp. nov., isolated from tidal flat sediment. Int J Syst Evol Microbiol 54:157–162 [CrossRef]
     [Google Scholar]
  22. Yi H., Chun J. 2004b; Nocardioides ganghwensis sp. nov., isolated from tidal flat sediment. Int J Syst Evol Microbiol 54:1295–1299 [CrossRef]
     [Google Scholar]
  23. Yi H., Chun J. 2004c; Nocardioides aestuarii sp. nov., isolated from tidal flat sediment. Int J Syst Evol Microbiol 54:2151–2154 [CrossRef]
     [Google Scholar]
  24. Yoon J. H., Kang S. J., Jung Y. T., Oh T. K. 2008; Aestuariicola saemankumensis gen. nov., sp. nov. a member of the family Flavobacteriaceae , isolated from tidal flat sediment. Int J Syst Evol Microbiol 58:2126–2131 [CrossRef]
     [Google Scholar]
  25. Yoon J. H., Kang S. J., Lee J. S., Oh T. K. 2009; Lutimaribacter saemankumensis gen. nov., sp. nov. isolated from a tidal flat of the Yellow Sea. Int J Syst Evol Microbiol 59:48–52 [CrossRef]
     [Google Scholar]
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Marinobacterium lutimaris sp. nov., isolated from a tidal flat
Int J Syst Evol Microbiol 60, 1828 (2010); https://doi.org/10.1099/ijs.0.016246-0
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