1887

Abstract

Analysis of the 16S rRNA gene sequences of the type strains of and shows a similarity of 98.3 %. There is no evidence for clear phenotypic differences between these organisms that justifies assignment to different genera. Both have ubiquinone Q-10 as the dominant quinone type and very similar fatty acid profiles, with 18 : 17 and 19 : 0 cyclo 8 predominating. A proposal is made to transfer to the genus as comb. nov. (type strain S1 =CIP 106844 =DSM 11099). Furthermore, a novel species within this genus, sp. nov., is described, with strain Sa14 (=CCUG 57044 =DSM 21857), isolated from air in a duck shed, as the type strain.

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2009-10-01
2020-01-27
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References

  1. Bambauer, A., Rainey, F. A., Stackebrandt, E. & Winter, J. ( 1998a; ). Characterization of Aquamicrobium defluvii gen. nov., sp. nov., a thiophene-2-carboxylate-metabolizing bacterium from activated sludge. Arch Microbiol 169, 293–302.[CrossRef]
    [Google Scholar]
  2. Bambauer, A., Rainey, F. A., Stackebrandt, E. & Winter, J. ( 1998b; ). Aquamicrobium defluvii sp. nov. In Validation of Publication of New Names and New Combinations Previously Effectively Published Outside the IJSB, List no. 66. Int J Syst Bacteriol 48, 631–632.[CrossRef]
    [Google Scholar]
  3. Collins, M. D. ( 1985; ). Isoprenoid quinone analyses in bacterial classification and identification. In Chemical Methods in Bacterial Systematics, pp. 267–287. Edited by M. Goodfellow & D. E. Minnikin. London: Academic Press.
  4. Fritsche, K., Auling, G., Andreesen, J. R. & Lechner, U. ( 1999a; ). Defluvibacter lusatiae gen. nov., sp. nov., a new chlorophenol-degrading member of the α-2 subgroup of proteobacteria. Syst Appl Microbiol 22, 197–204.[CrossRef]
    [Google Scholar]
  5. Fritsche, K., Auling, G., Andreesen, J. R. & Lechner, U. ( 1999b; ). Defluvibacter lusatiensis corrig., sp. nov. In Validation of Publication of New Names and New Combinations Previously Effectively Published Outside the IJSB, List no. 71. Int J Syst Bacteriol 49, 1325–1326.[CrossRef]
    [Google Scholar]
  6. Gerhardt, P., Murray, R. G. E., Wood, W. A. & Krieg, N. R. (editors) ( 1994; ). Methods for General and Molecular Bacteriology. Washington, DC: American Society for Microbiology.
  7. Grogan, D. W. & Cronan, J. E. ( 1997; ). Cyclopropane ring formation in membrane lipids of bacteria. Microbiol Mol Biol Rev 61, 429–441.
    [Google Scholar]
  8. Kämpfer, P. & Kroppenstedt, R. M. ( 1996; ). Numerical analysis of fatty acid patterns of coryneform bacteria and related taxa. Can J Microbiol 42, 989–1005.[CrossRef]
    [Google Scholar]
  9. Kämpfer, P., Steiof, M. & Dott, W. ( 1991; ). Microbiological characterisation of a fuel-oil contaminated site including numerical identification of heterotrophic water and soil bacteria. Microb Ecol 21, 227–251.[CrossRef]
    [Google Scholar]
  10. Kämpfer, P., Müller, C., Mau, M., Neef, A., Auling, G., Busse, H.-J., Osborn, A. M. & Stolz, A. ( 1999; ). Description of Pseudaminobacter gen. nov. with two new species, Pseudaminobacter salicylatoxidans sp. nov. and Pseudaminobacter defluvii sp. nov. Int J Syst Bacteriol 49, 887–897.[CrossRef]
    [Google Scholar]
  11. Kämpfer, P., Dreyer, U., Neef, A., Dott, W. & Busse, H.-J. ( 2003; ). Chryseobacterium defluvii sp. nov., isolated from wastewater. Int J Syst Evol Microbiol 53, 93–97.[CrossRef]
    [Google Scholar]
  12. Labbé, N., Parent, S. & Villemur, R. ( 2004; ). Nitratireductor aquibiodomus gen. nov., sp. nov., a novel α-proteobacterium from the marine denitrification system of the Montreal Biodome (Canada). Int J Syst Evol Microbiol 54, 269–273.[CrossRef]
    [Google Scholar]
  13. Lechner, U., Baumbach, R., Becker, D., Kitunen, V., Auling, G. & Salkinoja-Salonen, M. ( 1995; ). Degradation of 4-chloro-2-methylphenol by an activated sludge isolate and its taxonomic description. Biodegradation 6, 83–92.[CrossRef]
    [Google Scholar]
  14. Peix, A., Rivas, R., Trujillo, M. E., Vancanneyt, M., Velázquez, E. & Willems, A. ( 2005; ). Reclassification of Agrobacterium ferrugineum LMG 128 as Hoeflea marina gen. nov., sp. nov. Int J Syst Evol Microbiol 55, 1163–1166.[CrossRef]
    [Google Scholar]
  15. Tamura, K., Dudley, J., Nei, M. & Kumar, S. ( 2007; ). mega4: molecular evolutionary genetics analysis (mega) software version 4.0. Mol Biol Evol 24, 1596–1599.[CrossRef]
    [Google Scholar]
  16. Ziemke, F., Höfle, M. G., Lalucat, J. & Rosselló-Mora, R. ( 1998; ). Reclassification of Shewanella putrefaciens Owen's genomic group II as Shewanella baltica sp. nov. Int J Syst Bacteriol 48, 179–186.[CrossRef]
    [Google Scholar]
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