Mycobacterium riyadhense sp. nov., a non-tuberculous species identified as Mycobacterium tuberculosis complex by a commercial line-probe assay

References

1. Arend, S. M., de Haas, P. E. W., Leyten, E., Rosenkrands, I., Rigouts, L., Andersen, P., Mijs, W., van Dissel, J. T. & van Soolingen, D.(2005). ESAT-6 and CFP-10 in clinical versus environmental isolates of Mycobacterium kansasii. J Infect Dis 191, 1301–1310.[CrossRef] [Google Scholar]
2. CDC(1996).Standardized method for HPLC identification of mycobacteria. Atlanta, GA: Centers for Disease Control and Prevention, US Department of Health and Human Services, Public Health Service.
3. Griffith, D. E., Aksamit, T., Brown-Elliot, B. A., Catanzaro, A., Daley, C., Gordin, F., Holland, S. M., Horsburgh, R., Huitt, G. & other authors(2007). An official ATS/IDSA statement: diagnosis, treatment, and prevention of nontuberculous mycobacterial diseases. Am J Respir Crit Care Med 175, 367–416.[CrossRef] [Google Scholar]
4. Kent, P. T. & Kubica, G. P.(1985).Public Health Mycobacteriology. A Guide for the Level III Laboratory. Atlanta, GA: US Department of Health and Human Services.
5. Kim, B.-J., Lee, S.-H., Lyu, M.-A., Kim, S.-J., Bai, G.-H., Kim, S.-J., Chae, G.-T., Kim, E.-C., Cha, C.-Y. & Kook, Y.-H.(1999). Identification of mycobacterial species by comparative sequence analysis of the RNA polymerase gene (rpoB). J Clin Microbiol 37, 1714–1720. [Google Scholar]
6. Lewis, K. N., Liao, R., Guinn, K. M., Hickey, M. J., Smith, S., Behr, M. A. & Sherman, D. R.(2003). Deletion of RD1 from Mycobacterium tuberculosis mimics bacille Calmette-Guerin attenuation. J Infect Dis 187, 117–123.[CrossRef] [Google Scholar]
7. Marks, J., Jenkins, P. A. & Tsukamura, M.(1972).Mycobacterium szulgai – a new pathogen. Tubercle 53, 210–214.[CrossRef] [Google Scholar]
8. Roth, A., Fischer, M., Hamid, M. E., Michalke, S., Ludwig, W. & Mauch, H.(1998). Differentiation of phylogenetically related slowly growing mycobacteria based on 16S–23S rRNA gene internal transcribed spacer sequences. J Clin Microbiol 36, 139–147. [Google Scholar]
9. Springer, B., Stockman, L., Teschner, K., Roberts, G. D. & Bottger, E. C.(1996). Two-laboratory collaborative study on identification of mycobacteria: molecular versus phenotypic methods. J Clin Microbiol 34, 296–303. [Google Scholar]
10. Tamura, K., Dudley, J., Nei, M. & Kumar, S.(2007).mega4: molecular evolutionary genetics analysis (mega) software version 4.0. Mol Biol Evol 24, 1596–1599.[CrossRef] [Google Scholar]
11. Telenti, A., Marchesis, F., Balz, M., Bally, F., Bottger, E. C. & Bodmer, T.(1993). Rapid identification of mycobacteria to the species level by polymerase chain reaction and restriction enzyme analysis. J Clin Microbiol 31, 175–178. [Google Scholar]
12. Thompson, J. D., Gibson, T. J., Plewniak, F., Jeanmougin, F. & Higgins, D. G.(1997). The clustal_x windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools. Nucleic Acids Res 25, 4876–4882.[CrossRef] [Google Scholar]
13. van Ingen, J., Boeree, M. J., de Lange, W. C. M., de Haas, P. E. W., Dekhuijzen, P. N. R. & van Soolingen, D.(2008). Clinical relevance of Mycobacterium szulgai in the Netherlands. Clin Infect Dis 46, 1200–1205.[CrossRef] [Google Scholar]
14. van Klingeren, B., Dessens-Kroon, M., van der Laan, T., Kremer, K. & van Soolingen, D.(2007). Drug susceptibility testing of Mycobacterium tuberculosis complex using a high throughput, reproducible, absolute concentration method. J Clin Microbiol 45, 2662–2668.[CrossRef] [Google Scholar]
15. van Soolingen, D., de Haas, P. E. W., Hermans, P. W. M., Groenen, P. M. A. & van Embden, J. D. A.(1993). Comparison of various repetitive DNA elements as genetic markers for strain differentiation and epidemiology of Mycobacterium tuberculosis. J Clin Microbiol 31, 1987–1995. [Google Scholar]