1887

Abstract

A Gram-stain-positive bacterial isolate, strain 280/10 was isolated from the trachea of a white stork. The isolate was morphologically rod- to coccoid-shaped, non-motile and showed no oxidase activity. The highest 16S rRNA gene sequence similarity was found to the type strain of (97.3 % similarity) as the nearest relative of strain 280/10, all other 16S rRNA gene sequence similarities to type strains of species of the genus were below 94.2 %. Strain 280/10 had a quinone system consisting predominantly of menaquinone MK-8(H), minor quantities of MK-9(H) and small amounts of MK-8. The diamino acid of the peptidoglycan was -diaminopimelic acid. The major compounds in the polar lipid profiles were diphosphatidylglycerol, phoshatidylglycerol, phosphatidylinositol and an acidic glycolipid. Two phosphatidylinositol-mannosides and several unidentified lipids were also present. The strain contained corynemycolic acids, while only small amounts of cellular polyamines were detected. Spermidine and spermine were predominant in the polyamine pattern of 280/10 and putrescine was present in moderate amounts. In the fatty acid profile Cω9, and C were predominant. The strain was distinguishable from which is the most closely related species. In conclusion, strain 280/10 is proposed to represent a novel species of the genus with the name sp. nov. and the type strain 280/10 ( = CIP 110796 = LMG 28214).

Loading

Article metrics loading...

/content/journal/ijsem/10.1099/ijs.0.000014
2015-03-01
2024-04-18
Loading full text...

Full text loading...

/deliver/fulltext/ijsem/65/3/784.html?itemId=/content/journal/ijsem/10.1099/ijs.0.000014&mimeType=html&fmt=ahah

References

  1. Altenburger P., Kämpfer P., Makristathis A., Lubitz W., Busse H.-J. ( 1996 ). Classification of bacteria isolated from a medieval wall painting. . J Biotechnol 47, 3952. [View Article]
    [Google Scholar]
  2. Altenburger P., Kämpfer P., Akimov V. N., Lubit W., Busse H.-J. ( 1997 ). Polyamine distribution in actinomycetes with group B peptidoglycan and species of the genera Brevibacterium, Corynebacterium, and Tsukamurella . . Int J Syst Bacteriol 47, 270277. [View Article]
    [Google Scholar]
  3. Bernard K. A., Funke G. ( 2012 ). Genus I. Corynebacterium Lehmann and Neumann 1896, 350AL emend. Bernard, Wiebe Burdz, Reimer, Ng, Singh, Schindle and Pacheco 2010, 877. . In Bergey's Manual of Systematic Bacteriology ( The Actinobacteria), vol. 5 , 2nd edn., part A, pp. 245289. Edited by Goodfellow M., Kämpfer P., Busse H.-J., Trujillo M. E., Suzuki K.-I., Ludwig W., Whitman W. B. . New York:: Springer;.
    [Google Scholar]
  4. Brennan N. M., Brown R., Goodfellow M., Ward A. C., Beresford T. P., Simpson P. J., Fox P. F., Cogan T. M. ( 2001 ). Corynebacterium mooreparkense sp. nov. and Corynebacterium casei sp. nov., isolated from the surface of a smear-ripened cheese. . Int J Syst Evol Microbiol 51, 843852. [View Article] [PubMed]
    [Google Scholar]
  5. Brosius J., Palmer M. L., Kennedy P. J., Noller H. F. ( 1978 ). Complete nucleotide sequence of a 16S ribosomal RNA gene from Escherichia coli. . Proc Natl Acad Sci U S A 75, 48014805. [CrossRef]
    [Google Scholar]
  6. Busse H.-J. ( 2012 ). Family I. Corynebacteriaceae Lehmann and Neumann 1902AL emend. Stackebrandt, Rainey and Ward-Rainey 1997, 485 emend. Zhi, Li and Stackebrandt 2009, 593. . In Bergey's Manual of Systematic Bacteriology ( The Actinobacteria), vol. 5, , 2nd edn., (), part A, pp. 244245. Edited by Goodfellow M., Kämpfer P., Busse H.-J., Trujillo M. E., Suzuki K.-I., Ludwig W., Whitman W. B. . New York:: Springer;.
    [Google Scholar]
  7. Busse H.-J., Auling G. ( 1988 ). Polyamine pattern as a chemotaxonomic marker within the Proterobacteria . . Syst Appl Microbiol 11, 18. [View Article]
    [Google Scholar]
  8. Chen H.-H., Li W.-J., Tang S.-K., Kroppenstedt R. M., Stackebrandt E., Xu L.-H., Jiang C. L. ( 2004 ). Corynebacterium halotolerans sp. nov., isolated from saline soil in the west of China. . Int J Syst Evol Microbiol 54, 779782. [View Article] [PubMed]
    [Google Scholar]
  9. Collins M. D., Jones D. ( 1981 ). Distribution of isoprenoid quinone structural types in bacteria and their taxonomic implication. . Microbiol Rev 45, 316354.[PubMed]
    [Google Scholar]
  10. Collins M. D., Goodfellow M., Minnikin D. E. ( 1982 ). A survey of the structures of mycolic acids in Corynebacterium and related taxa. . J Gen Microbiol 128, 129149.[PubMed]
    [Google Scholar]
  11. Felsenstein J. ( 1985 ). Confidence limits of phylogenies: an approach using the bootstrap. . Evolution 39, 783791. [View Article]
    [Google Scholar]
  12. Felsenstein, J. (2005). phylip (phylogeny inference package), version 3.6. Distributed by the author. Department of Genome Sciences, University of Washington, Seattle, USA.
  13. Fernández-Garayzábal J. F., Vela A. I., Egido R., Hutson R. A., Lanzarot M. P., Fernández-García M., Collins M. D. ( 2004 ). Corynebacterium ciconiae sp. nov., isolated from the trachea of black storks (Ciconia nigra . ). Int J Syst Evol Microbiol 54, 21912195. [View Article] [PubMed]
    [Google Scholar]
  14. Frischmann A., Knoll A., Hilbert F., Zasada A. A., Kämpfer P., Busse H.-J. ( 2012 ). Corynebacterium epidermidicanis sp. nov., isolated from skin of a dog. . Int J Syst Evol Microbiol 62, 21942200. [View Article] [PubMed]
    [Google Scholar]
  15. Gerhardt P., Murray R. G. E., Wood W. A., Krieg N. R. (editors) ( 1994 ). Methods for General and Molecular Bacteriology. Washington, DC:: American Society for Microbiology;.
    [Google Scholar]
  16. Jukes T. H., Cantor C. R. ( 1969 ). Evolution of the protein molecules. . In Mammalian protein metabolism, pp. 21132. Edited by Munro H. N. . New York:: Academic Press;. [View Article]
    [Google Scholar]
  17. Kämpfer P., Kroppenstedt R. M. ( 1996 ). Numerical analysis of fatty acid patterns of coryneform bacteria and related taxa. . Can J Microbiol 42, 9891005. [View Article]
    [Google Scholar]
  18. Kämpfer P., Steiof M., Dott W. ( 1991 ). Microbiological characterization of a fuel-oil contaminated site including numerical identification of heterotrophic water and soil bacteria. . Microb Ecol 21, 227251. [View Article] [PubMed]
    [Google Scholar]
  19. Kämpfer P., Lodders N., Warfolomeow I., Falsen E., Busse H. J. ( 2009 ). Corynebacterium lubricantis sp. nov., isolated from a coolant lubricant. . Int J Syst Evol Microbiol 59, 11121115. [View Article] [PubMed]
    [Google Scholar]
  20. Ludwig W., Strunk O., Westram R., Richter L., Meier H., Yadhukumar, Buchner A., Lai T., Steppi S. & other authors ( 2004 ). arb: a software environment for sequence data. . Nucleic Acids Res 32, 13631371. [View Article] [PubMed]
    [Google Scholar]
  21. Minnikin D., Patel P., Alshamaony L., Goodfellow M. ( 1977 ). Polar Lipid composition in the classification of Nocardia and related bacteria. . Int J Syst Bacteriol 27, 104117. [View Article]
    [Google Scholar]
  22. Pruesse E., Peplies J., Glöckner F. O. ( 2012 ). SINA: accurate high-throughput multiple sequence alignment of ribosomal RNA genes. . Bioinformatics 28, 18231829. [View Article] [PubMed]
    [Google Scholar]
  23. Schleifer K.-H., Kandler O. ( 1972 ). Peptidoglycan types of bacterial cell walls and their taxonomic implications. . Bacteriol Rev 36, 407477.[PubMed]
    [Google Scholar]
  24. Schumann P. ( 2011 ). Peptidoglycan Structure. . In Taxonomy of Prokaryotes, Methods in Microbiology, vol. 38, pp. 101129. Edited by Rainey F., Oren A. . London:: Academic Press;. [View Article]
    [Google Scholar]
  25. Sjödén B., Funke G., Izquierdo A., Akervall E., Collins M. D. ( 1998 ). Description of some coryneform bacteria isolated from human clinical specimens as Corynebacterium falsenii sp. nov.. Int J Syst Bacteriol 48, 6974. [View Article] [PubMed]
    [Google Scholar]
  26. Stamatakis A. ( 2006 ). RAxML-VI-HPC: maximum likelihood-based phylogenetic analyses with thousands of taxa and mixed models. . Bioinformatics 22, 26882690. [View Article] [PubMed]
    [Google Scholar]
  27. Tindall B. J. ( 1990a ). Lipid composition of Halobacterium lacusprofundi . . FEMS Microbiol Lett 66, 199202. [View Article]
    [Google Scholar]
  28. Tindall B. J. ( 1990b ). A comparative study of the lipid composition of Halobacterium saccharovorum from various sources. . Syst Appl Microbiol 13, 128130. [View Article]
    [Google Scholar]
  29. Wiertz R., Schulz S. C., Müller U., Kämpfer P., Lipski A. ( 2013 ). Corynebacterium frankenforstense sp. nov. and Corynebacterium lactis sp. nov., isolated from raw cow milk. . Int J Syst Evol Microbiol 63, 44954501. [View Article] [PubMed]
    [Google Scholar]
  30. Yarza P., Richter M., Peplies J., Euzeby J., Amann R., Schleifer K.-H., Ludwig W., Glöckner F. O., Rosselló-Móra R. ( 2008 ). The All-Species Living Tree project: a 16S rRNA-based phylogenetic tree of all sequenced type strains. . Syst Appl Microbiol 31, 241250. [View Article] [PubMed]
    [Google Scholar]
  31. Zimmermann O., Spröer C., Kroppenstedt R. M., Fuchs E., Köchel H. G., Funke G. ( 1998 ). Corynebacterium thomssenii sp. nov., a Corynebacterium with N-acetyl-β-glucosaminidase activity from human clinical specimens. . Int J Syst Bacteriol 48, 489494. [View Article] [PubMed]
    [Google Scholar]
http://instance.metastore.ingenta.com/content/journal/ijsem/10.1099/ijs.0.000014
Loading
/content/journal/ijsem/10.1099/ijs.0.000014
Loading

Data & Media loading...

Supplements

Supplementary Data

PDF
This is a required field
Please enter a valid email address
Approval was a Success
Invalid data
An Error Occurred
Approval was partially successful, following selected items could not be processed due to error