1887

Abstract

A total of 11 strains of moderately halophilic histamine-producing bacteria isolated from fermented squid liver sauce were studied phenotypically, genotypically, and phylogenetically. These strains are considered members of the genus based on their physiological, morphological, and chemotaxonomic characteristics. A16S rRNA gene sequence analysis showed that these strains clustered with, but were separate from, . The results of DNA-DNA hybridization experiments indicated that the new isolates represent a new species, for which we propose the name ; strain X-1 (= JCM 10006) is the type strain of this species.

Loading

Article metrics loading...

/content/journal/ijsem/10.1099/00207713-47-3-832
1997-07-01
2022-08-19
Loading full text...

Full text loading...

/deliver/fulltext/ijsem/47/3/ijs-47-3-832.html?itemId=/content/journal/ijsem/10.1099/00207713-47-3-832&mimeType=html&fmt=ahah

References

  1. American Oil Chemists’ Society 1990 Official methods and recommended practices, 4. American Oil Chemists’ Society; Chicago:111
    [Google Scholar]
  2. Anonymous 1994; Validation of the publication of new names and new combinations previously effectively published outside the USB. List no. 49. Int. J. Syst. Bacteriol 44:370–371
    [Google Scholar]
  3. Bligh E. G., Dyer W. J. 1959; A rapid method of total lipid extraction and purification. Can. J. Biochem. Physiol 37:911–917
    [Google Scholar]
  4. Collins M. D., Williams A. M., Wallbanks S. 1990; The phylogeny of Aerococcus and Pediococcus as determined by 16S rRNA sequence analysis: description of Tetragenococcus gen. nov. FEMS Microbiol. Lett 70:255–262
    [Google Scholar]
  5. Ezaki T., Hashimoto Y., Yabuuchi E. 1989; Fluorometric deoxyribonucleic acid-deoxyribonucleic acid hybridization in microdilution wells as an alternative to membrane filter hybridization in which radioisotopes are used to determine genetic relatedness among bacterial strains. Int. J. Syst. Bacteriol 39:224–229
    [Google Scholar]
  6. Garvie E. I. 1986; Genus Pediococcus Claussen 1903, 68AL. 1075–1079 Sneath P. H. A., Mair N. S., Sharpe M. E., Holt J. G. Bergey’s manual of systematic bacteriology 2 The Williams & Wilkins Co.; Baltimore, Md:
    [Google Scholar]
  7. Ito H., Hadioetomo R. S., Nikkuni S., Okada N. 1985; Studies on lactic acid bacteria in fish sauces (part 1). Chemical composition and microflora of fish sauce. Rep. Natl. Food Res. Inst 47:23–30
    [Google Scholar]
  8. Ito H., Hadioetomo R. S., Nikkuni S., Okada N. 1985; Studies on lactic acid bacteria in fish sauces (part 2). Identification of salt-tolerance and acid-producing bacteria from fish sauces. Rep. Natl. Food Res. Inst 47:31–40
    [Google Scholar]
  9. Kimura M. 1980; A simple method for estimating evolutionary rates of base substitution through comparative studies of nucleotide sequences. J. Mol. Biol 16:111–120
    [Google Scholar]
  10. Kozaki M., Okada S., Uchimura T. 1992 Laboratory manual for lactic acid bacteria Asakura-shoten; Tokyo, Japan: In Japanese
    [Google Scholar]
  11. Roling W. F. M., van Verseveld H. W. 1996; Characterization of Tet-ragenococcus halophila populations in Indonesian soy mash (Kecap) fermentation. Appl. Environ. Microbiol 62:1203–1207
    [Google Scholar]
  12. Saitou N., Nei M. 1987; The neighbor-joining method: a new method for reconstructing phylogenetic trees. Mol. Biol. Evol 4:406–425
    [Google Scholar]
  13. Sambrook J., Fritsch E. F., Maniatis T. 1989 Molecular cloning: a laboratory manual, 2. Cold Spring Harbor Laboratory, Cold Spring Harbor; N.Y:
    [Google Scholar]
  14. Sato T., Fujii T., Masuda M., Okuzumi M. 1994; Changes of numbers of histamine-metabolic bacteria and histamine content during storage of common mackerel. Fish. Sci 60:299–302
    [Google Scholar]
  15. Suzuki T., Yamasato K. 1994; Phylogeny of spore-forming lactic acid bacteria based on 16S rRNA gene sequences. FEMS Microbiol. Lett 115:13–18
    [Google Scholar]
  16. Tamaoka J., Komagata K. 1984; Determination of DNA base composition by reversed-phase high performance liquid chromatography. FEMS Microbiol. Lett 25:125–128
    [Google Scholar]
  17. Thompson J. D., Higgins D. G., Gibson T. J. 1994; Clustal W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, positions-specific gap penalties and weight matrix choice. Nucleic Acids Res 22:4673–4680
    [Google Scholar]
  18. Uchida K., Mogi K. 1972; Cellular fatty acid spectra of Pediococcus species in relation to their taxonomy. J. Gen. Appl. Microbiol 18:109–129
    [Google Scholar]
  19. Uchida K. 1989; Multiplicity in soy pediococci carbohydrate fermentation and its application for analysis of their flora. J. Gen. Appl. Microbiol 28:215–225
    [Google Scholar]
  20. Wayne L. G., Brenner D. J., Colwell R. R., Grimont P. A. D., Kandler O., Krichevsky M. I., Moore L. H., Moore W. E. C., Murray R. G. E., Stackebrandt E., Starr M. P., Trüper H. G. 1987; Report of the Ad Hoc Committee on Reconciliation of Approaches Bacterial Systematics. Int. J. Syst. Bacteriol 37:463–464
    [Google Scholar]
  21. Weiss N. 1992; The genera Pediococcus and Aerococcus. 1503–1507 Balows A., Trüper H. G., Dworkin M., Harder W., Schleifer K. H. The prokaryotes, 2. 2 Springer Verlag; New York, N.Y:
    [Google Scholar]
http://instance.metastore.ingenta.com/content/journal/ijsem/10.1099/00207713-47-3-832
Loading
/content/journal/ijsem/10.1099/00207713-47-3-832
Loading

Data & Media loading...

Most cited this month Most Cited RSS feed

This is a required field
Please enter a valid email address
Approval was a Success
Invalid data
An Error Occurred
Approval was partially successful, following selected items could not be processed due to error