Reclassification of (Stutzer 1929) Strains to a New Genus, , as comb. nov. and sp. nov. Free

Abstract

On the basis of genotypic, chemotaxonomic, and phenotypic data, was excluded from the emended genus . In the present study, the known heterogeneity within this species was examined by a polyphasic approach that included DNA-rRNA hybridizations, a determination of DNA base ratios, DNA-DNA hybridizations, a numerical analysis of whole-cell protein patterns, a determination of cellular fatty acid compositions, and a phenotypic analysis. All of the methods revealed the presence of two distinct species. We propose that strains should be placed in a new genus, the genus , which comprises two species, comb. nov. and sp. nov.

Loading

Article metrics loading...

/content/journal/ijsem/10.1099/00207713-46-4-926
1996-10-01
2024-03-29
Loading full text...

Full text loading...

/deliver/fulltext/ijsem/46/4/ijs-46-4-926.html?itemId=/content/journal/ijsem/10.1099/00207713-46-4-926&mimeType=html&fmt=ahah

References

  1. Bergey D. H., Harrisson F. C., Breed R. S., Hammer B. W., Huntoon F. M. 1923 Bergey’s manual of determinative bacteriology, 1st ed The Williams and Wilkins Co.; Baltimore:
    [Google Scholar]
  2. Bernardet J.-F., Grimont P. A. D. 1989; Deoxyribonucleic acid relatedness and phenotypic characterization of Flexibacter columnaris sp. nov., nom. rev., Flexibacterpsychrophilus sp. nov., nom. rev., and Flexibacter maritimus Wakabayashi, Hikida, and Masumura 1986. Int. J. Syst. Bacteriol 39:346–354
    [Google Scholar]
  3. Bernardet J.-F., Segers P., Vancanneyt M., Berthe F., Kersters K., Vandamme P. 1996; Cutting a Gordian knot: emended classification and description of the genus Flavobacterium, emended description of the family Flavobacteriaceae, and proposal of Flavobacterium hydatis nom. nov. (basonym, Cytophaga aquatilis Strohl and Tait 1978). Int. J. Syst. Bacteriol 46:128–148
    [Google Scholar]
  4. Dees S. B., Moss C. W., Hollis D. G., Weaver R. E. 1986; Chemical characterization of Flavobacterium odoratum, Flavobacterium breve, and Flavobacterium-\ike groups He, Ilh, and Ilf. J. Clin. Microbiol 23:267–273
    [Google Scholar]
  5. De Ley J. 1970; Reexamination of the association between melting point, buoyant density, and chemical base composition of deoxyribonucleic acid. J. Bacteriol 101:738–754
    [Google Scholar]
  6. De Ley J., Cattoir H., Reynaerts A. 1970; The quantitative measurement of DNA hybridization from renaturation rates. Eur. J. Biochem 12:133–142
    [Google Scholar]
  7. Gherna R., Woese C. R. 1992; A partial phylogenetic analysis of the “flavobacter-bacteroides” phylum: basis for taxonomic restructuring. Syst. Appl. Microbiol 15:513–521
    [Google Scholar]
  8. Hamana K., Matsuzaki S. 1990; Occurrence of homospermidinc as a major polyamine in the authentic genus Flavobacterium. Can. J. Microbiol 36:228–231
    [Google Scholar]
  9. Holmes B. 1992 The genera Flavobacterium, Sphingobacterium and Weeksella. 3620–3630 Balows A., Triiper H. G., Dworkin M., Harder W., Schleifcr K.-H.ed The prokaryotes, 2nd. 4 Springer-Verlag; Berlin:
    [Google Scholar]
  10. Holmes B., Owen R. J., McMeekin T. A. 1984 Genus Flavobacterium Bergey, Harrison, Breed, Hammer and Huntoon 1923, 97AL. 353–361 Krieg N. R., Holt J. G.ed Bergey’s manual of systematic bacteriology 1 The Williams and Wilkins Co.; Baltimore:
    [Google Scholar]
  11. Kersters K., Hinz K.-H., Hertle A., Segers P., Lievens A., Siegmann O., De Ley J. 1984; Bordetella avium sp. nov., isolated from the respiratory tracts of turkeys and other birds. Int. J. Syst. Bacteriol 34:56–70
    [Google Scholar]
  12. Marmur J., Doty P. 1962; Determination of the base composition of deoxyribonucleic acid from its thermal denaturation temperature. J. Mol. Biol 5:109–118
    [Google Scholar]
  13. Nakagawa Y., Yamasato K. 1993; Phylogenetic diversity of the genus Cytophaga revealed by 16S rRNA sequencing and menaquinone analysis. J. Gen. Microbiol 139:1155–1161
    [Google Scholar]
  14. Nakagawa Y., Yamasato K. 1996; Emendation of the genus Cytophaga and transfer of Cytophaga agarovorans and Cytophaga salmonicolor to Marinilabilia gen. nov.: phylogenetic analysis of the Flavobacterium-Cytophaga complex. Int. J. Syst. Bacteriol 46:599–603
    [Google Scholar]
  15. Owen R. J., Holmes B. 1978; Heterogeneity in the characteristics of deoxyribonucleic acid from Flavobacterium odoratum. FEMS Microbiol. Lett 48:41–46
    [Google Scholar]
  16. Pot B., Vandamme P., Kersters K. 1994 Analysis of electrophoretic whole-organism protein fingerprints. 493–521 Goodfellow M., O’Donnell A. G.ed Chemical methods in prokaryotic systematics J. Wiley and Sons; Chichester, United Kingdom:
    [Google Scholar]
  17. Rasoamananjara D., Korosec B., Monteil H. 1987; Classification and identification of Flavobacterium species by carbon source utilization. J. Clin. Microbiol 25:1285–1290
    [Google Scholar]
  18. Rasoamananjara D., Peladan F., Turlot J. C., Monteil H., Richard C. 1986; Characterization of Flavobacterium species by analysis of volatile fatty acid production. J. Gen. Microbiol 132:2723–2732
    [Google Scholar]
  19. Reichenbach H. 1989 Order I. Cytophagales Leadbetter 1974, 99AE. 2011–2013 Staley J. T., Bryant M. P., Pfennig N., Holt J. G.ed Bergey’s manual of systematic bacteriology 3 The Williams and Wilkins Co.; Baltimore:
    [Google Scholar]
  20. Segers P., Mannheim W., Vancanneyt M., De Brandt K., Hinz K.-H., Kersters K., Vandamme P. 1993; Riemerella anatipestifer gen. nov., the causative agent of septicemia anserum exsudativa, and its phylogenetic affiliation within the Flavobacterium-Cytophaga rRNA homology group. Int. J. Syst. Bacteriol 43:768–776
    [Google Scholar]
  21. Vandamme P., Bernardet J.-F., Segers P., Kersters K., Holmes B. 1994; New perspectives in the classification of the flavobacteria: description of Chryseobacterium gen. nov., Bergeyella gen. nov., and Empedobacter notn. rev. Int. J. Syst. Bacteriol 44:827–831
    [Google Scholar]
  22. Vandamme P., Segers P., Vancanneyt M., Van Hove K., Mutters R., Hommez J., Dewhirst F. E., Paster B. J., Kersters K., Falsen E., Devriese L. A., Bisgaard M., Hinz K.-H., Mannheim W. 1994; Description of Omithobacterium rhinotracheale gen. nov., sp. nov. isolated from the avian respiratory tract. Int. J. Syst. Bacteriol 44:24–37
    [Google Scholar]
  23. Vandamme P., Vancanneyt M., Pot B., Mels L., Hoste B., Dewettinck D., Vlaes L., Van den Borre C., Higgins R., Hommez J., Kersters K., Butzler J.-P., Goossens H. 1992; Polyphasic taxonomic study of the emended genus Arcobacter with Arcobacter butzleri comb. nov. and Arcobacter skirrowii sp. nov., an aerotolerant bacterium isolated from veterinary specimens. Int. J. Syst. Bacteriol 42:344–356
    [Google Scholar]
  24. Van Landschoot A., De Ley J. 1983; Intraand intergeneric similarities of the rRNA cistrons of Alteromonas, Marinomonas (gen. nov.) and some other gram-negative bacteria. J. Gen. Microbiol 129:3057–3074
    [Google Scholar]
  25. Vauterin L., Vauterin P. 1992; Computer-aided objective comparison of electrophoresis patterns for grouping and identification of microorganisms. Eur. Microbiol 1:37–41
    [Google Scholar]
  26. von Graevenitz A. 1995 Acinetobacter, Alcaligenes, Moraxella, and other nonfermentative Gram-negative bacteria. 520–532 Murray P. R., Baron E. J., Pfaller M. A., Tenover F. C., Yolken R. H.ed Manual of clinical microbiology, 6th. ASM Press; Washington, D.C:
    [Google Scholar]
  27. Woese C. R., Yang D., Mandelco L., Stetter K. O. 1990; The Flexibacter- Flavobacter connection. Syst. Appl. Microbiol 13:161–165
    [Google Scholar]
  28. Yabuuchi E., Kaneko T., Yano I., Moss C. W., Miyoshi N. 1983; Sphingobacterium gen. nov., Sphingobacterium spiritivorum comb, nov., Sphingobacterium multivorum comb, nov., Sphingobacterium mizutae sp. nov., and Flavobacterium indologenes sp. nov.: glucose-nonfermenting gram-negative rods in CDC groups Ilk-2 and lib. Int. J. Syst. Bacteriol 33:580–598
    [Google Scholar]
http://instance.metastore.ingenta.com/content/journal/ijsem/10.1099/00207713-46-4-926
Loading
/content/journal/ijsem/10.1099/00207713-46-4-926
Loading

Data & Media loading...

Most cited Most Cited RSS feed