Genomic Analysis of Different Chlorobium Strains by Pulsed-Field Gel Electrophoresis and Ribotyping

References

1. Avissar Y. J., Beale S. I. 1990; Cloning and expression of a structural gene from Chlorobium vibrioforme that complements the hemA mutation in Escherichia coli. J. Bacteriol 172:1656–1659
   [Google Scholar]
2. Cole S. T., Saint Girons I. 1994; Bacterial genomics. FEMS Microbiol. Rev 14:139–160
   [Google Scholar]
3. Gibson J., Ludwig W., Stackebrandt E., Woese C. R. 1985; The phylogeny of the green photosynthetic bacteria: absence of a close relationship between Chlorobium and Chloroflexus. Syst. Appl. Microbiol 6:152–156
   [Google Scholar]
4. Guerrero R., Montesinos E., Pedrós-Alió C., Esteve I., Mas J., van Gemerden H., Hofman P. A. G., Bakker J. F. 1985; Phototrophic sulfur bacteria in two Spanish lakes: vertical distribution and limiting factors. Limnol. Oceanogr 30:919–931
   [Google Scholar]
5. Kjaerulff S., Diep D. B. J., Okkels S., Scheller H. V., Ormerod J. G. 1994; Highly efficient integration of foreign DNA into the genome of the green sulfur bacterium Chlorobium vibrioforme by homologous recombination. Photosynth. Res 41:277–283
   [Google Scholar]
6. McClelland M., Jones M., Patel Y., Nelson M. 1987; Restriction endonucleases for pulsed field mapping of bacterial genomes. Nucleic Acids Res 15:5985–6005
   [Google Scholar]
7. Méndez-Álvarez S., Pavón V., Esteve I., Guerrero R., Gaju N. 1994; Transformation of Chlorobium limicola by a plasmid that confers the ability to utilize thiosulfate. J. Bacteriol 176:7395–7397
   [Google Scholar]
8. Méndez-Álvarez S., Pavón V., Esteve I., Guerrero R., Gaju N. 1995; Genomic heterogeneity in Chlorobium limicola: chromosomic and plasmidic differences among strains. FEMS Microbiol. Lett 134:279–285
   [Google Scholar]
9. Nassar A., Bertheau Y., Dervin C., Narcy J., Lemattre M. 1994; Ribotyping of Erwinia chrysanthemi strains in relation to their pathogenic and geographic distribution. Appl. Environ. Microbiol 60:3781–3789
   [Google Scholar]
10. Naterstad K., Kolsto A., Sirevag R. 1995; Physical map of the genome of the green phototrophic bacterium Chlorobium tepidum. J. Bacteriol 177:5480–5484
    [Google Scholar]
11. Pfennig N. 1989 Green sulfur bacteria. 1682–1709 Staley J. T., Bryant M. P., Pfennig N., Holt J. G.ed Bergey’s manual of systematic bacteriology 3 Williams and Wilkins; Baltimore:
    [Google Scholar]
12. Pfennig N., Trüper H. G. 1992 The family Chlorobiaceae,. 3583–3592 Starr M. P., Stolp H., Triiper H. G., Schlegel H. G.ed The prokaryotes Springer-Verlag; Berlin:
    [Google Scholar]
13. Pibernat I. 1996 Ph.D. thesis Universitat de Girona; Girona, Spain:
14. Rodrigo A. G., Borges K. M., Bergquist P. L. 1994; Pulsed-field gel electrophoresis of genomic digests of Thermus strains and its implications for taxonomic and evolutionary studies. Int. J. Syst. Bacteriol 44:547–552
    [Google Scholar]
15. Sambrook J., Fritsch E. F., Maniatis T. 1989 Molecular cloning: a laboratory manual, 2nd. Cold Spring Harbor Laboratory; Cold Spring Harbor, N.Y:
    [Google Scholar]
16. Sameeh S. M., Garcia M., Taylor D. E. 1992; Differentiation of the subspecies of Campylobacter fetus by genomic sizing. Int. J. Syst. Bacteriol 42:446–450
    [Google Scholar]
17. Schwartz D. C., Cantor C. R. 1984; Separation of yeast chromosome sized DNAs by pulsed field gel gradient electrophoresis. Cell 37:67–75
    [Google Scholar]
18. Smith C. L., Cantor C. R. 1987; Purification, specific fragmentation and separation of large DNA molecules. Methods Enzymol 155:449–467
    [Google Scholar]
19. Smith C. L., Klco C. R., Cantor C. R. 1988 Pulsed field gel electrophoresis and the technology of large DNA molecules. 211–272 Davies K. E.ed Genome analysis A practical approach. IRL; Oxford:
    [Google Scholar]
20. Van Gemerden H., Beeftink H. H. 1983 Ecology of phototrophic bacteria. 146–185 Ormerod J. G.ed The phototrophic bacteria Blackwell; Oxford:
    [Google Scholar]
21. Wahlund T. M., Madigan M. T. 1995; Genetic transfer by conjugation in the thermophilic green sulfur bacterium Chlorobium tepidum. J. Bacteriol 177:2583–2588
    [Google Scholar]
22. Wahlund T. M., Woese C. R., Castenholz R. W., Madigan M. T. 1991; A thermophilic green sulfur bacterium from New Zealand hot springs, Chlorobium tepidum sp. nov. Arch. Microbiol 156:81–90
    [Google Scholar]