Phylogenetic Analysis of the Genus Listeria Based on Reverse Transcriptase Sequencing of 16S rRNA

References

1. Brosius J., Palmer J. L., Kennedy J. P., Noller H. F. 1978; Complete nucleotide sequence of a 16S ribosomal RNA gene from Escherichica coli. Proc. Natl. Acad. Sei. USA 75:4801–4805
   [Google Scholar]
2. Collins M. D., Ash C., Farrow J. A. E., Wallbanks S., Williams A. M. 1990; 16S Ribosomal ribonucleic acid sequence analyses of lactococci and related taxa. Description of Vagococcus fluvialis gen. nov., sp. nov. J. Appl. Bacteriol. 67:453–460
   [Google Scholar]
3. Collins M. D., Farrow J. A. E., Phillips B. A., Ferusu S., Jones D. 1987; Classification of Lactobacillus divergens, Lactobacillus piscícola, and some catalase-negative, asporogenous, rod-shaped bacteria from poultry in a new genus, Carnobacterium. Int. J. Syst. Bacteriol. 37:310–316
   [Google Scholar]
4. Collins M. D., Jones D. 1981; The distribution of isoprenoid quinone structural types in bacteria and their taxonomic implications. Microbiol. Rev. 45:316–354
   [Google Scholar]
5. Collins M. D., Jones D., Goodfellow M., Minnikin D. E. 1979; Isoprenoid quinone composition as a guide to the classification of Listeria, Brochothrix, Erysipelothrix and Caryophanon. J. Gen. Microbiol. 111:453–457
   [Google Scholar]
6. Collins M. D., Rodrigues U., Ash C., Aguirre M., Farrow J. A. E., Martinez-Murcia A., Phillips B. A., Williams A. M., Wallbanks S. 1991; Phylogenetic analysis of the genus Lactobacillus and related lactic acid bacteria as determined by reverse transcriptase sequencing of 16S rRNA. FEMS Microbiol. Lett. 77:5–12
   [Google Scholar]
7. Collins M. D., Williams A. M., Wallbanks S. 1990; The phylogeny of Aerococcus and Pediococcus as determined by 16S rRNA sequence analysis: description of Tetragenococcus gen. nov. FEMS Microbiol. Lett. 70:255–262
   [Google Scholar]
8. Davis G. H. G., Fomin L., Wilson E., Newton K. G. 1969; Numerical taxonomy of Listeria, Streptococci and possibly related bacteria. J. Gen. Microbiol. 57:333–348
   [Google Scholar]
9. De Vriese L. A., Ceyssens K., Rodrigues U., Collins M. D. 1990; Enterococcus columbae, a species from pigeon intestines. FEMS Microbiol. Lett. 71:247–252
   [Google Scholar]
10. Embley M., Smida J., Stackebrandt E. 1988; Reverse transcriptase sequencing of ribosomal RNA from Faenia rectivirgula, Pseudonocardia thermophila and Saccharopolyspora hirsuta, three wall type IV actinomycetes which lack mycolic acids. J. Gen. Microbiol. 134:961–966
    [Google Scholar]
11. Felsenstein J. 1982; Numerical method for inferring evolutionary trees. Q. Rev. Biol. 57:379–404
    [Google Scholar]
12. Feresu S. B., Jones D. 1988; Taxonomic studies on Brochothrix, Erysipoelothrix, Listeria and atypical lactobacilli. J. Gen. Microbiol. 134:1165–1183
    [Google Scholar]
13. Fitch W. M., Margoliash E. 1967; Construction of phylogenetic trees: a method based on mutation distances as estimated from cytochrome c sequences is of general applicability. Science 155:279–285
    [Google Scholar]
14. Gray M. W., Sankoff D., Cedergren R. J. 1984; On the evolutionary descent of organisms and organelles: a global phylogeny based on a highly conserved structural core in small subunit ribosomal RNA. Nucleic Acids Res. 12:5837–5852
    [Google Scholar]
15. Hori H., Osawa S. 1979; Evolutionary change in 5S rRNA secondary structure and phylogenetic tree of 54 5S rRNA species. Proc. Natl. Acad. Sci. USA 76:381–385
    [Google Scholar]
16. Jones D. 1975; A numerical taxonomic study of coryneform and related bacteria. J. Gen. Microbiol. 87:52–96
    [Google Scholar]
17. Lane D. J., Pace B., Olsen G. J., Stahl D. A., Sogin M. L., Pace N. R. 1985; Rapid determination of 16S ribosomal RNA sequences for phylogenetic analyses. Proc. Natl. Acad. Sci. USA 82:6955–6959
    [Google Scholar]
18. Ludwig W., Schleifer K. H., Stackebrandt E. 1984; 16S rRNA analysis of Listeria monocytogenes and Brochothrix thermosphacta. FEMS Microbiol. Lett. 25:199–204
    [Google Scholar]
19. Martinez-Murcia A. J., Collins M. D. 1990; A phylogenetic analysis of the genus Leuconostoc based on reverse transcriptase sequencing of 16S rRNA. FEMS Microbiol. Lett. 70:73–84
    [Google Scholar]
20. Queen C., Korn L. J. 1984; A comprehensive sequence analysis program for the IBM personal computer. Nucleic Acids Res. 12:581–599
    [Google Scholar]
21. Rocourt J., Griment F., Grimont P. A. D., Seeliger H. P. R. 1982; DNA relatedness among serovars of Listeria monocytogenes sensu lato. Curr. Microbiol. 7:383–388
    [Google Scholar]
22. Rocourt J., Wehmeyer U., Cossart P., Stackebrandt E. 1987; Proposal to retain Listeria murrayi and Listeria grayi in the genus Listeria. Int. J. Syst. Bacteriol. 37:298–300
    [Google Scholar]
23. Rocourt J., Wehmeyer U., Stackebrandt E. 1987; Transfer of Listeria denitrificans to a new genus, J one sia gen. nov., as Jonesia denitrificans comb. nov.. Int. J. Syst. Bacteriol. 37:266–270
    [Google Scholar]
24. Sanger F., Nicklen S., Coulson A. R. 1977; DNA sequencing with chain-terminating inhibitors. Proc. Natl. Acad. Sei. USA 74:5463–5467
    [Google Scholar]
25. Seeliger H. P. R., Jones D. 1985 Genus Listeria. 1235–1245 Sneath P. H. A., Mair N. S., Sharpe M. E., Holt J. G.ed Bergey’s manual of systematic bacteriology 2 The Williams & Wilkins Co.; Baltimore:
    [Google Scholar]
26. Shaw N. 1974; Lipid composition as a guide to the classification of bacteria. Adv. Appl. Microbiol. 17:63–108
    [Google Scholar]
27. Sneath P. H. A., Jones D. 1976; Brochothrix, a new genus tentatively placed in the family Lactobacillaceae. Int. J. Syst. Bacteriol. 26:102–104
    [Google Scholar]
28. Stuart M. R., Pease P. E. 1972; A numerical study of the relationships of Listeria and Erysipelothrix. J. Gen. Microbiol. 73:551–565
    [Google Scholar]
29. Stuart S. E., Welshimer H. J. 1973; The intrageneric relatedness of Listeria Pirie. Int. J. Syst. Bacteriol. 23:8–14
    [Google Scholar]
30. Wallbanks S., Martinez-Murcia A. J., Fryer J. L., Phillips B. A., Collins M. D. 1990; 16S ribosomal ribonucleic acid sequence determination of members of the genus Carnobacterium and related lactic acid bacteria. Description of Vagococcus salmoninarum sp. nov.. Int. J. Syst. Bacteriol. 40:224–230
    [Google Scholar]
31. Wilkinson B. J., Jones D. 1977; A numerical taxonomic survey of Listeria and related bacteria. J. Gen. Microbiol. 98:399–421
    [Google Scholar]
32. Williams A. M., Collins M. D. 1990; Molecular taxonomic studies on Streptococcus uberis types I and II. Description of Streptococcus parauberis sp. nov. J. Appl. Bacteriol. 68:485–490
    [Google Scholar]
33. Williams A. M., Farrow J. A. E., Collins M. D. 1989; Reverse transcriptase sequencing of 16S ribosomal RNA from Streptococcus cecorum. Lett. Appl. Microbiol. 8:185–189
    [Google Scholar]
34. Woese C. R. 1987; Bacterial evolution. Microbiol. Rev. 51:221–271
    [Google Scholar]