1887

Abstract

The diversity among 191 bacterial strains isolated from stem and root nodules (151 and 40 strains, respectively) of grown in different geographical areas in Senegal and in The Philippines was studied by using DNA-DNA hybridization techniques (S1 nuclease method), by determining DNA base compositions, by performing legume nodulation tests, and by determining nitrogenase activity. The following conclusions were drawn. (i) All of the strains produced stem and root nodules on . (ii) Most of the organisms (184 strains) belonged to the genus ; their guanine-plus-cytosine contents ranged from 66 to 68 mol%, they fixed N under free-living conditions, and they produced effective nodules on the stems and roots of . (iii) The seven other strains probably belonged to the genus , since guanine-plus-cytosine contents ranged from 59 to 63 mol% and they did not fix N under free-living conditions; three strains produced effective root nodules, but their stem nodules exhibited very low activity or were ineffective, and the four remaining strains produced ineffective nodules on both stems and roots. (iv) The genetic diversity among the 184 strains allowed us to divide them into two genomic species; genomic species 1 constituted the major group (175 strains) and corresponded to since all of the strains were more than 79% related to type strain ORS 571, and genomic species 2 contained nine strains that were only 44 to 53% related to type strain ORS 571 (difference between the denaturation temperatures of homologous and heterologous hybrids, more than 6°C) and more than 76% related to reference strains SD02 and SG28 (difference between the denaturation temperatures of homologous and heterologous hybrids, less than 3°C). The species that were distinct from cannot be named until they can be differentiated by phenotypic tests.

Loading

Article metrics loading...

/content/journal/ijsem/10.1099/00207713-41-1-114
1991-01-01
2024-04-19
Loading full text...

Full text loading...

/deliver/fulltext/ijsem/41/1/ijsem-41-1-114.html?itemId=/content/journal/ijsem/10.1099/00207713-41-1-114&mimeType=html&fmt=ahah

References

  1. Adebayo A., Watanabe I., Ladha J. K. 1989; Epiphytic occurrence of Azorhizobium caulinodans and other rhizobia on host and nonhost legumes. Appl. Environ. Microbiol. 55:2407–2409
    [Google Scholar]
  2. Brenner D. J., McWorter A. C., Leete Knutson J. K., Steigerwalt A. G. 1982; Escherichia vulneris’. a new species of Enterobacteriaceae associated with human wounds. J. Clin. Microbiol. 15:1133–1140
    [Google Scholar]
  3. Chen W. X., Yan G. H., Li J. L. 1988; Numerical taxonomic study of fast-growing soybean rhizobia and a proposal that Rhizobium fredii be assigned to Sinorhizobium gen. nov. Int. J. Syst. Bacteriol. 38:392–397
    [Google Scholar]
  4. Crosa J. M., Brenner D. J., Falkow S. 1973; Use of a single-strand-specific nuclease for analysis of bacterial and plasmid deoxyribonucleic acid homo- and heteroduplexes. J. Bacteriol. 115:904–911
    [Google Scholar]
  5. De Ley J. 1978 Modem molecular methods in bacterial taxonomy: evaluation, application, prospects. 347–357 Proceedings of the Fourth International Conference on Plant Pathogenic Bacteria Institut National de la Recherche Agronomique; Angers, France:
    [Google Scholar]
  6. Dreyfus B., Elmerich C., Dommergues Y. R. 1983; Free-living Rhizobium strains able to grow on N2 as the sole nitrogen source. Appl. Environ. Microbiol. 45:711–713
    [Google Scholar]
  7. Dreyfus B., García J. L., Gillis M. 1988; Characterization of Azorhizobium caulinodans gen. nov., sp. nov., a stem-nodulating nitrogen-fixing bacterium isolated from Sesbania rostrata. Int. J. Syst. Bacteriol. 38:89–98
    [Google Scholar]
  8. Elmerich C., Dreyfus B. L., Reysset G., Aubert J. P. 1982; Genetic analysis of nitrogen fixation in a tropical fast-growing Rhizobium. EMBO J. 4:499–503
    [Google Scholar]
  9. Fernandez M. P., Meugnier H., Grimont P. A. D., Bardin R. 1989; Deoxyribonucleic acid relatedness among members of the genus Frankia. Int. J. Syst. Bacteriol. 39:424–429
    [Google Scholar]
  10. Gehrke C. W., McCune R. A., Gama Soao M. A., Ehrlich M., Kuo K. C. 1984; Quantitative reverse-phase high-performance liquid chromatography of major and modified nucleosides in DNA. J. Chromatogr. 301:199–219
    [Google Scholar]
  11. Grimont P. A. D. 1988; Use of DNA reassociation in bacterial classification. Can. J. Microbiol. 34:541–546
    [Google Scholar]
  12. Grimont P. A. D., Popoff M. Y., Grimont F., Coynault C., Lemelin M. 1980; Reproducibility and correlation study of three deoxyribonucleic acid hybridization procedures. Curr. Microbiol. 4:325–330
    [Google Scholar]
  13. Jarvis B. D. W., Gillis M., De Ley J. 1986; Intra- and intergeneric similarities between ribosomal ribonucleic acid cistrons of Rhizobium and Bradyrhizobium species and some related bacteria. Int. J. Syst. Bacteriol. 36:129–138
    [Google Scholar]
  14. Jarvis B. D. W., Pankhurst C. E., Patel J. J. 1982; Rhizobium loti, a new species of legume root nodule bacteria. Int. J. Syst. Bacteriol. 32:378–380
    [Google Scholar]
  15. Jordan D. C. 1982; Transfer of Rhizobium japonicum Buchanan 1980 to Bradyrhizobium gen. nov., a genus of slow-growing root nodule bacteria from leguminous plants. Int. J. Syst. Bacteriol. 32:136–139
    [Google Scholar]
  16. Jordan D. C. 1984 Family III. Rhizobiaceae Conn 1938. 234–244 Krieg N. R., Holt J. G.ed Bergey’s manual of systematic bacteriology 1 The Williams & Wilkins Co.; Baltimore:
    [Google Scholar]
  17. Jordan D. C., Allen O. N. 1974 Family III. Rhizobiaceae Conn 1938. 261–267 Buchanan R. E., Gibbons N. E.ed Bergey’s manual of determinative bacteriology, 8th. The Williams & Wilkins Co.; Baltimore:
    [Google Scholar]
  18. Keister D. L. 1975; Acetylene reduction by pure cultures of rhizobia. J. Bacteriol. 123:1263–1268
    [Google Scholar]
  19. Kurz W. G. W., La Rue T. A. 1975; Nitrogenase activity in rhizobia in absence of plant host. Nature (London) 256:407–408
    [Google Scholar]
  20. Ladha J. K., Watanabe I., Saono S. 1988 Nitrogen fixation by leguminous green manure and practices for its enhancement in tropical lowland rice. 165–183 Sustainable agriculture: green manure in rice farming International Rice Research Institute; Los Banos, The Philippines:
    [Google Scholar]
  21. McComb J. A., Elliot J., Dilworth M. J. 1975; Acetylene reduction by Rhizobium in pure culture. Nature (London) 256:409–410
    [Google Scholar]
  22. Pagan J. D., Child J. J., Scowcroft W. R., Gibson A. H. 1975; Nitrogen fixation by Rhizobium cultured on a define medium. Nature (London) 256:406–407
    [Google Scholar]
  23. Peyret M., Freney J., Meugnier H., Fleurette J. 1989; Determination of G+C content of DNA using high-performance liquid chromatography for the identification of Staphylococci and Micrococci. Res. Microbiol. 140:467–475
    [Google Scholar]
  24. Rigby P. W. J., Dieckmann M., Rhodes C., Berg P. 1977; Labelling deoxyribonucleic acid to high specific activity in vitro by nick translation with DNA polymerase I. Int. J. Syst. Bacteriol. 113:237–251
    [Google Scholar]
  25. Rinaudo G., Alazard D., Moudiongui A. 1988 Stem-nodulating legumes as green manure for rice in West Africa. 97–109 Sustainable agriculture: green manure in rice farming International Rice Research Institute; Los Banos, The Philippines:
    [Google Scholar]
  26. Saint Macary H., Marqueses E. A., Torres R. O., Morris R. A. 1985; Effect of flooding on growth and nitrogen fixation of two Sesbania species. Philipp. J. Crop Sci. 10:17–20
    [Google Scholar]
  27. Scholia M. H., Elkan G. H. 1984; Rhizobium fredii sp. nov., a fast-growing species that effectively nodulates soybeans. Int. J. Syst. Bacteriol. 34:484–486
    [Google Scholar]
  28. Wayne L. G., Brenner D. J., Colwell R. R., Grimont P. A. D., Kandler O., Krichevsky M. I., Moore L. H., Moore W. E. C., Murray R. G. E., Stackebrandt E., Starr M. P., Trüper H. G. 1987; Report of the Ad Hoc Committee on Reconciliation of Approaches to Bacterial Systematics. Int. J. Syst. Bacteriol. 34:463–464
    [Google Scholar]
http://instance.metastore.ingenta.com/content/journal/ijsem/10.1099/00207713-41-1-114
Loading
/content/journal/ijsem/10.1099/00207713-41-1-114
Loading

Data & Media loading...

This is a required field
Please enter a valid email address
Approval was a Success
Invalid data
An Error Occurred
Approval was partially successful, following selected items could not be processed due to error